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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA045118
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 5668.5
Min nTPM: 207.1
Std nTPM: 1182.1
Median nTPM: 0.0
352_1
62 years, male
5668.5
354_1
81 years, female
5076.6
172_1
72 years, female
4927.7
350_1
84 years, female
4499.9
349_1
83 years, male
4382.2
386_1
76 years, male
4080.9
163_1
78 years, male
4003.9
243_1
75 years, male
3819.9
218_1
71 years, female
3699.3
319_1
81 years, male
3677.5
394_1
75 years, female
3585.5
356_1
87 years, female
3535.3
425_1
59 years, female
3519.0
379_1
60 years, male
3496.6
447_1
81 years, male
3467.5
321_1
62 years, female
3437.3
355_1
70 years, female
3420.4
6_1
73 years, female
3416.1
177_1
74 years, male
3307.4
376_1
75 years, female
3141.0
353_1
82 years, female
3091.4
377_1
82 years, female
3091.3
335_1
73 years, female
3020.3
480_1
63 years, male
2942.3
292_1
71 years, male
2866.2
317_1
60 years, male
2776.6
404_1
82 years, female
2728.9
351_1
91 years, male
2693.7
389_1
86 years, female
2668.8
503_1
68 years, male
2592.1
406_1
79 years, male
2563.2
318_1
68 years, male
2543.3
286_1
68 years, female
2541.1
517_1
88 years, male
2455.0
316_1
62 years, male
2448.3
99_1
64 years, male
2350.3
347_1
72 years, male
2321.9
320_1
89 years, female
2313.4
229_1
69 years, female
2313.3
375_1
74 years, female
2311.5
115_1
83 years, male
2235.9
526_1
61 years, male
2200.8
506_1
65 years, male
2181.0
291_1
76 years, male
2174.6
293_1
68 years, female
2172.1
251_1
78 years, male
2103.7
173_1
67 years, male
2094.7
189_1
76 years, male
2094.2
384_1
83 years, male
2093.1
322_1
76 years, male
2089.0
452_1
88 years, female
2068.8
468_1
89 years, male
2048.7
348_1
84 years, male
1997.0
9_1
66 years, female
1985.5
246_1
77 years, male
1973.3
265_1
87 years, male
1936.1
324_1
76 years, male
1907.2
295_1
61 years, female
1896.1
264_1
73 years, female
1746.8
237_1
82 years, male
1739.2
2_1
77 years, female
1735.1
405_1
91 years, male
1693.1
396_1
62 years, male
1675.9
266_1
85 years, male
1638.3
217_1
76 years, male
1547.3
254_1
77 years, female
1537.1
145_1
84 years, male
1490.3
126_1
63 years, male
1449.3
518_1
75 years, female
1366.9
35_1
74 years, female
1322.3
120_1
70 years, female
1317.9
117_1
61 years, male
1316.3
499_1
55 years, female
1275.5
311_1
78 years, male
1274.0
4_1
88 years, female
1235.8
288_1
66 years, female
1215.6
137_1
83 years, male
1199.2
17_1
71 years, male
1159.6
18_1
88 years, male
1149.9
142_1
61 years, female
990.2
307_1
66 years, female
956.4
81_1
67 years, male
951.9
109_1
81 years, female
942.0
32_1
67 years, male
918.2
315_1
62 years, female
911.8
313_1
79 years, female
893.6
42_1
85 years, male
856.6
153_1
70 years, female
841.0
415_1
77 years, female
778.8
119_1
70 years, female
767.1
314_1
67 years, male
764.5
162_1
79 years, female
726.2
308_1
70 years, female
707.4
43_1
64 years, female
686.0
139_1
64 years, female
638.5
466_1
57 years, female
576.2
414_1
84 years, female
571.4
495_1
57 years, female
453.9
89_1
63 years, male
451.3
41_1
94 years, female
443.7
149_1
88 years, male
371.7
413_1
59 years, female
262.0
490_1
67 years, female
259.7
501_1
88 years, male
218.0
491_1
89 years, female
207.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.