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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:64.2 nTPM
HPA:64.2 nTPM
GTEx:40.4 nTPM
FANTOM5:1.2 Scaled Tags Per Million
Pig:14.5 nTPM
Mouse:0.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051692Antibody HPA053492
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.2
Sample id Sample description nTPM
Hippocampus
nTPM: 63.0
2148 Female, age 91, left hemisphere 65.4
1911 Female, age 85, right hemisphere 63.0
2529 Female, age 94, left hemisphere 62.8
2621 Female, age 67, right hemisphere 62.8
1898 Male, age 80, left hemisphere 62.2
1855 Male, age 76, left hemisphere 61.7
Dentate gyrus
nTPM: 63.8
2528 Male, age 74, both hemispheres 65.2
2531 Female, age 67, both hemispheres 64.5
2530 Female, age 94, left hemisphere 64.2
2010 Male, age 76, both hemispheres 63.3
2246 Female, age 85, both hemispheres 62.9
1927 Female, age 91, both hemispheres 62.8
Entorhinal gyrus
nTPM: 63.7
2613 Female, age 94, left hemisphere 65.0
2764 Male, age 80, right hemisphere 64.6
2686 Male, age 75, right hemisphere 64.4
2117 Female, age 91, right hemisphere 62.9
1787 Male, age 76, left hemisphere 62.8
1938 Female, age 85, left hemisphere 62.6
Hippocampus, CA1
nTPM: 63.1
1873 Female, age 85, both hemispheres 64.3
2082 Female, age 91, right hemisphere 63.8
2045 Male, age 76, both hemispheres 63.7
2527 Male, age 74, both hemispheres 63.2
2749 Male, age 80, left hemisphere 60.6
Hippocampus, CA2
nTPM: 62.6
1940 Female, age 85, left hemisphere 64.0
2249 Male, age 74, both hemispheres 63.0
2113 Female, age 91, right hemisphere 62.6
1963 Male, age 80, left hemisphere 62.1
1892 Male, age 76, both hemispheres 62.0
2437 Female, age 94, left hemisphere 61.8
Hippocampus, CA3
nTPM: 63.2
2620 Female, age 94, left hemisphere 65.9
1891 Female, age 85, both hemispheres 63.7
2436 Male, age 74, both hemispheres 63.3
2861 Female, age 67, both hemispheres 63.2
1867 Male, age 76, both hemispheres 62.0
2137 Male, age 80, left hemisphere 61.3
Parahippocampal cortex
nTPM: 64.1
2532 Female, age 72, left hemisphere 66.6
2693 Female, age 94, both hemispheres 66.5
1990 Female, age 91, right hemisphere 64.5
2245 Female, age 91, both hemispheres 64.3
2622 Female, age 67, right hemisphere 64.1
1933 Female, age 85, both hemispheres 64.0
2692 Male, age 74, both hemispheres 63.8
2018 Male, age 76, both hemispheres 63.4
1850 Male, age 80, both hemispheres 62.3
2250 Female, age 67, right hemisphere 62.0
Perirhinal gyrus
nTPM: 64.2
2521 Female, age 94, right hemisphere 66.3
1841 Female, age 85, right hemisphere 65.0
2848 Male, age 76, right hemisphere 64.8
1794 Male, age 80, right hemisphere 63.0
1847 Female, age 91, left hemisphere 62.1
Subiculum
nTPM: 64.0
2619 Male, age 74, both hemispheres 65.7
2042 Male, age 76, both hemispheres 64.3
1901 Male, age 80, both hemispheres 63.7
1977 Female, age 85, both hemispheres 63.7
2729 Female, age 91, right hemisphere 63.5
2438 Female, age 94, left hemisphere 62.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.4
Samples: 197

Max nTPM: 135.7
Min nTPM: 2.5
Std nTPM: 22.4
Median nTPM: 34.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 135.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 118.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 108.9
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 108.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 106.1
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 94.8
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 91.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 89.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 88.8
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 88.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 83.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.2
FF:10153-102I9 76 years, female 1.5
FF:10169-103B7 60 years, female 1.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.2
Samples: 4

Max nTPM: 9.9
Min nTPM: 5.7
Sample A Female 9.9
Sample B Female 8.2
Sample C Male 8.8
Sample D Male 5.7
Entorhinal cortex
nTPM: 14.5
Samples: 4

Max nTPM: 19.3
Min nTPM: 11.8
Sample A Female 13.3
Sample B Female 11.8
Sample C Male 19.3
Sample D Male 13.5
Subiculum
nTPM: 12.2
Samples: 4

Max nTPM: 18.2
Min nTPM: 9.3
Sample A Female 18.2
Sample B Female 10.8
Sample C Male 9.3
Sample D Male 10.6
Ventral hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 9.4
Min nTPM: 5.3
Sample A Female 8.3
Sample B Female 6.3
Sample C Male 9.4
Sample D Male 5.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.2
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.4
Sample C Female 0.2
Sample D Female 0.0
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.1
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71920279 Antisense, RP_051012_03_B10, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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