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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:61.2 nTPM
HPA:61.2 nTPM
GTEx:53.1 nTPM
FANTOM5:29.2 Scaled Tags Per Million
Pig:23.3 nTPM
Mouse:108.6 nTPM
Allen mouse:8.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016579Antibody HPA059374
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.2
Sample id Sample description nTPM
Hippocampus
nTPM: 59.8
1898 Male, age 80, left hemisphere 64.0
2148 Female, age 91, left hemisphere 59.8
2621 Female, age 67, right hemisphere 59.7
1855 Male, age 76, left hemisphere 59.6
1911 Female, age 85, right hemisphere 58.6
2529 Female, age 94, left hemisphere 57.4
Dentate gyrus
nTPM: 58.8
2530 Female, age 94, left hemisphere 59.7
2531 Female, age 67, both hemispheres 59.3
1927 Female, age 91, both hemispheres 59.2
2528 Male, age 74, both hemispheres 59.1
2010 Male, age 76, both hemispheres 57.9
2246 Female, age 85, both hemispheres 57.7
Entorhinal gyrus
nTPM: 59.9
2613 Female, age 94, left hemisphere 62.1
2764 Male, age 80, right hemisphere 61.6
1787 Male, age 76, left hemisphere 60.0
2117 Female, age 91, right hemisphere 59.2
1938 Female, age 85, left hemisphere 59.0
2686 Male, age 75, right hemisphere 57.6
Hippocampus, CA1
nTPM: 60.1
2749 Male, age 80, left hemisphere 68.1
2045 Male, age 76, both hemispheres 59.0
1873 Female, age 85, both hemispheres 58.8
2527 Male, age 74, both hemispheres 58.7
2082 Female, age 91, right hemisphere 55.7
Hippocampus, CA2
nTPM: 59.9
1963 Male, age 80, left hemisphere 64.2
1892 Male, age 76, both hemispheres 63.0
2437 Female, age 94, left hemisphere 61.0
2249 Male, age 74, both hemispheres 58.3
1940 Female, age 85, left hemisphere 56.5
2113 Female, age 91, right hemisphere 56.1
Hippocampus, CA3
nTPM: 61.2
2861 Female, age 67, both hemispheres 63.6
2137 Male, age 80, left hemisphere 63.2
2620 Female, age 94, left hemisphere 61.8
1867 Male, age 76, both hemispheres 61.2
2436 Male, age 74, both hemispheres 58.9
1891 Female, age 85, both hemispheres 58.3
Parahippocampal cortex
nTPM: 57.3
2622 Female, age 67, right hemisphere 58.4
1850 Male, age 80, both hemispheres 58.3
1933 Female, age 85, both hemispheres 58.2
2692 Male, age 74, both hemispheres 58.1
2245 Female, age 91, both hemispheres 57.3
2532 Female, age 72, left hemisphere 57.2
2018 Male, age 76, both hemispheres 57.1
1990 Female, age 91, right hemisphere 56.5
2250 Female, age 67, right hemisphere 56.4
2693 Female, age 94, both hemispheres 55.7
Perirhinal gyrus
nTPM: 60.0
1794 Male, age 80, right hemisphere 61.7
2521 Female, age 94, right hemisphere 61.0
1847 Female, age 91, left hemisphere 60.9
2848 Male, age 76, right hemisphere 58.8
1841 Female, age 85, right hemisphere 57.8
Subiculum
nTPM: 60.0
2438 Female, age 94, left hemisphere 62.5
1977 Female, age 85, both hemispheres 61.2
1901 Male, age 80, both hemispheres 60.7
2619 Male, age 74, both hemispheres 59.3
2729 Female, age 91, right hemisphere 58.3
2042 Male, age 76, both hemispheres 58.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.1
Samples: 197

Max nTPM: 108.5
Min nTPM: 20.6
Std nTPM: 13.6
Median nTPM: 51.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 108.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 99.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 85.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 82.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 81.6
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 81.1
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 79.8
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 78.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 78.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 76.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 76.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.2
FF:10169-103B7 60 years, female 31.3
FF:10153-102I9 76 years, female 27.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.3
Samples: 4

Max nTPM: 30.0
Min nTPM: 17.6
Sample A Female 30.0
Sample B Female 23.4
Sample C Male 22.3
Sample D Male 17.6
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 21.9
Min nTPM: 17.6
Sample A Female 21.7
Sample B Female 19.3
Sample C Male 21.9
Sample D Male 17.6
Subiculum
nTPM: 19.9
Samples: 4

Max nTPM: 27.0
Min nTPM: 16.3
Sample A Female 27.0
Sample B Female 17.8
Sample C Male 18.3
Sample D Male 16.3
Ventral hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 26.3
Min nTPM: 16.5
Sample A Female 22.1
Sample B Female 16.5
Sample C Male 26.3
Sample D Male 24.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 108.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 107.7
Samples: 4

Max nTPM: 114.8
Min nTPM: 99.4
Sample A Male 99.4
Sample B Male 108.8
Sample C Female 114.8
Sample D Female 107.7
Hippocampal formation
nTPM: 108.7
Samples: 4

Max nTPM: 116.3
Min nTPM: 99.1
Sample A Male 116.3
Sample B Male 99.1
Sample C Female 111.7
Sample D Female 107.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
69059877 Antisense, RP_050317_04_D06, Mouse strain C57BL/6J (56 days, male) 8.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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