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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:36.8 nTPM
HPA:36.8 nTPM
GTEx:23.9 nTPM
FANTOM5:12.9 Scaled Tags Per Million
Pig:15.4 nTPM
Mouse:4.4 nTPM
Allen mouse:4.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000592
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.8
Sample id Sample description nTPM
Hippocampus
nTPM: 34.9
2529 Female, age 94, left hemisphere 39.6
1911 Female, age 85, right hemisphere 35.9
2148 Female, age 91, left hemisphere 35.9
1898 Male, age 80, left hemisphere 34.2
2621 Female, age 67, right hemisphere 32.5
1855 Male, age 76, left hemisphere 31.4
Dentate gyrus
nTPM: 33.3
2528 Male, age 74, both hemispheres 39.0
1927 Female, age 91, both hemispheres 34.8
2246 Female, age 85, both hemispheres 33.1
2531 Female, age 67, both hemispheres 32.7
2530 Female, age 94, left hemisphere 30.9
2010 Male, age 76, both hemispheres 29.3
Entorhinal gyrus
nTPM: 36.8
2117 Female, age 91, right hemisphere 39.8
2686 Male, age 75, right hemisphere 38.0
1938 Female, age 85, left hemisphere 36.7
1787 Male, age 76, left hemisphere 36.5
2764 Male, age 80, right hemisphere 35.3
2613 Female, age 94, left hemisphere 34.3
Hippocampus, CA1
nTPM: 32.9
2527 Male, age 74, both hemispheres 37.3
1873 Female, age 85, both hemispheres 34.3
2082 Female, age 91, right hemisphere 33.2
2045 Male, age 76, both hemispheres 31.1
2749 Male, age 80, left hemisphere 28.7
Hippocampus, CA2
nTPM: 32.7
2113 Female, age 91, right hemisphere 35.2
2437 Female, age 94, left hemisphere 34.1
2249 Male, age 74, both hemispheres 33.2
1940 Female, age 85, left hemisphere 32.1
1963 Male, age 80, left hemisphere 31.5
1892 Male, age 76, both hemispheres 29.9
Hippocampus, CA3
nTPM: 33.6
2861 Female, age 67, both hemispheres 39.1
1891 Female, age 85, both hemispheres 35.3
2620 Female, age 94, left hemisphere 32.9
1867 Male, age 76, both hemispheres 32.2
2436 Male, age 74, both hemispheres 32.1
2137 Male, age 80, left hemisphere 30.3
Parahippocampal cortex
nTPM: 34.7
2692 Male, age 74, both hemispheres 41.5
2622 Female, age 67, right hemisphere 36.0
1933 Female, age 85, both hemispheres 35.5
1990 Female, age 91, right hemisphere 34.7
2250 Female, age 67, right hemisphere 34.6
2018 Male, age 76, both hemispheres 33.6
2693 Female, age 94, both hemispheres 33.6
2245 Female, age 91, both hemispheres 33.1
1850 Male, age 80, both hemispheres 32.6
2532 Female, age 72, left hemisphere 32.2
Perirhinal gyrus
nTPM: 33.0
1847 Female, age 91, left hemisphere 34.1
1794 Male, age 80, right hemisphere 33.7
2848 Male, age 76, right hemisphere 32.7
1841 Female, age 85, right hemisphere 32.4
2521 Female, age 94, right hemisphere 32.2
Subiculum
nTPM: 35.1
2619 Male, age 74, both hemispheres 42.4
2729 Female, age 91, right hemisphere 38.0
1977 Female, age 85, both hemispheres 34.3
1901 Male, age 80, both hemispheres 33.5
2042 Male, age 76, both hemispheres 31.3
2438 Female, age 94, left hemisphere 31.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.9
Samples: 197

Max nTPM: 65.2
Min nTPM: 5.3
Std nTPM: 10.5
Median nTPM: 22.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 65.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 59.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 55.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 50.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 49.6
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 49.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 49.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 45.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 45.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 44.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 44.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.9
FF:10153-102I9 76 years, female 18.6
FF:10169-103B7 60 years, female 7.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 21.6
Min nTPM: 12.1
Sample A Female 14.2
Sample B Female 12.8
Sample C Male 12.1
Sample D Male 21.6
Entorhinal cortex
nTPM: 15.4
Samples: 4

Max nTPM: 18.7
Min nTPM: 13.5
Sample A Female 13.5
Sample B Female 14.4
Sample C Male 18.7
Sample D Male 15.1
Subiculum
nTPM: 14.5
Samples: 4

Max nTPM: 16.6
Min nTPM: 12.4
Sample A Female 15.2
Sample B Female 12.4
Sample C Male 13.7
Sample D Male 16.6
Ventral hippocampus
nTPM: 15.1
Samples: 4

Max nTPM: 17.7
Min nTPM: 12.3
Sample A Female 13.7
Sample B Female 12.3
Sample C Male 17.7
Sample D Male 16.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.5
Samples: 4

Max nTPM: 3.9
Min nTPM: 3.1
Sample A Male 3.9
Sample B Male 3.7
Sample C Female 3.3
Sample D Female 3.1
Hippocampal formation
nTPM: 4.4
Samples: 4

Max nTPM: 5.0
Min nTPM: 4.0
Sample A Male 4.5
Sample B Male 4.0
Sample C Female 4.0
Sample D Female 5.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.5
69672007 Antisense, RP_050428_02_G11, Mouse strain C57BL/6J (56 days, male) 4.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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