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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:62.8 nTPM
HPA:62.8 nTPM
GTEx:51.2 nTPM
FANTOM5:136.5 Scaled Tags Per Million
Mouse:280.8 nTPM
Allen mouse:19.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044863
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.8
Sample id Sample description nTPM
Hippocampus
nTPM: 40.9
1898 Male, age 80, left hemisphere 52.1
2621 Female, age 67, right hemisphere 41.9
2529 Female, age 94, left hemisphere 41.1
1855 Male, age 76, left hemisphere 39.3
2148 Female, age 91, left hemisphere 36.8
1911 Female, age 85, right hemisphere 34.4
Dentate gyrus
nTPM: 44.0
1927 Female, age 91, both hemispheres 62.0
2010 Male, age 76, both hemispheres 46.1
2246 Female, age 85, both hemispheres 42.2
2531 Female, age 67, both hemispheres 40.4
2528 Male, age 74, both hemispheres 37.5
2530 Female, age 94, left hemisphere 36.1
Entorhinal gyrus
nTPM: 43.5
1938 Female, age 85, left hemisphere 59.2
2764 Male, age 80, right hemisphere 53.4
1787 Male, age 76, left hemisphere 46.9
2613 Female, age 94, left hemisphere 40.3
2686 Male, age 75, right hemisphere 32.7
2117 Female, age 91, right hemisphere 28.7
Hippocampus, CA1
nTPM: 49.8
2749 Male, age 80, left hemisphere 79.9
2045 Male, age 76, both hemispheres 47.7
1873 Female, age 85, both hemispheres 44.8
2527 Male, age 74, both hemispheres 40.0
2082 Female, age 91, right hemisphere 36.9
Hippocampus, CA2
nTPM: 42.1
1892 Male, age 76, both hemispheres 64.6
1963 Male, age 80, left hemisphere 44.3
2249 Male, age 74, both hemispheres 36.7
2437 Female, age 94, left hemisphere 36.4
2113 Female, age 91, right hemisphere 35.5
1940 Female, age 85, left hemisphere 35.1
Hippocampus, CA3
nTPM: 47.4
2137 Male, age 80, left hemisphere 73.5
2620 Female, age 94, left hemisphere 50.5
1867 Male, age 76, both hemispheres 50.1
2436 Male, age 74, both hemispheres 38.1
1891 Female, age 85, both hemispheres 36.9
2861 Female, age 67, both hemispheres 35.0
Parahippocampal cortex
nTPM: 46.9
1850 Male, age 80, both hemispheres 63.5
2245 Female, age 91, both hemispheres 57.4
1990 Female, age 91, right hemisphere 52.8
2250 Female, age 67, right hemisphere 51.5
1933 Female, age 85, both hemispheres 49.9
2532 Female, age 72, left hemisphere 49.1
2693 Female, age 94, both hemispheres 38.7
2622 Female, age 67, right hemisphere 38.0
2018 Male, age 76, both hemispheres 35.6
2692 Male, age 74, both hemispheres 32.5
Perirhinal gyrus
nTPM: 62.8
1847 Female, age 91, left hemisphere 79.5
1794 Male, age 80, right hemisphere 67.8
1841 Female, age 85, right hemisphere 61.9
2848 Male, age 76, right hemisphere 56.8
2521 Female, age 94, right hemisphere 48.0
Subiculum
nTPM: 38.9
1977 Female, age 85, both hemispheres 49.6
1901 Male, age 80, both hemispheres 47.8
2438 Female, age 94, left hemisphere 41.1
2042 Male, age 76, both hemispheres 34.4
2619 Male, age 74, both hemispheres 33.3
2729 Female, age 91, right hemisphere 27.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.2
Samples: 197

Max nTPM: 117.3
Min nTPM: 14.8
Std nTPM: 21.4
Median nTPM: 50.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 117.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 99.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 96.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 95.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 95.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 94.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 93.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 92.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 91.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 91.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 89.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 136.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 136.5
FF:10169-103B7 60 years, female 154.8
FF:10153-102I9 76 years, female 118.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 280.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 280.9
Samples: 4

Max nTPM: 307.4
Min nTPM: 269.1
Sample A Male 269.1
Sample B Male 275.3
Sample C Female 271.6
Sample D Female 307.4
Hippocampal formation
nTPM: 252.8
Samples: 4

Max nTPM: 258.0
Min nTPM: 243.5
Sample A Male 256.3
Sample B Male 258.0
Sample C Female 253.2
Sample D Female 243.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.9
67936212 Antisense, RP_040407_01_E10, Mouse strain C57BL/6J (56 days, male) 22.1
71665000 Antisense, RP_050927_04_G11, Mouse strain C57BL/6J (56 days, male) 17.8

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.