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FNBP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:47.0 nTPM
HPA:47.0 nTPM
GTEx:46.4 nTPM
FANTOM5:71.1 Scaled Tags Per Million
Pig:51.5 nTPM
Mouse:52.8 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019635Antibody HPA019691Antibody HPA022119
Glial cells Not detectedLowNot detected
Neuronal cells Not detectedMediumNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.0
Sample id Sample description nTPM
Hippocampus
nTPM: 40.4
2529 Female, age 94, left hemisphere 49.7
1911 Female, age 85, right hemisphere 42.9
2621 Female, age 67, right hemisphere 39.1
2148 Female, age 91, left hemisphere 38.9
1855 Male, age 76, left hemisphere 36.2
1898 Male, age 80, left hemisphere 35.3
Dentate gyrus
nTPM: 38.8
2530 Female, age 94, left hemisphere 47.3
2528 Male, age 74, both hemispheres 42.8
2010 Male, age 76, both hemispheres 40.8
2246 Female, age 85, both hemispheres 38.1
2531 Female, age 67, both hemispheres 34.9
1927 Female, age 91, both hemispheres 28.6
Entorhinal gyrus
nTPM: 42.7
2117 Female, age 91, right hemisphere 56.5
2686 Male, age 75, right hemisphere 45.4
2764 Male, age 80, right hemisphere 43.0
1787 Male, age 76, left hemisphere 38.4
1938 Female, age 85, left hemisphere 37.1
2613 Female, age 94, left hemisphere 35.7
Hippocampus, CA1
nTPM: 35.6
2527 Male, age 74, both hemispheres 43.7
2082 Female, age 91, right hemisphere 39.0
1873 Female, age 85, both hemispheres 38.6
2045 Male, age 76, both hemispheres 29.9
2749 Male, age 80, left hemisphere 26.7
Hippocampus, CA2
nTPM: 37.2
2113 Female, age 91, right hemisphere 41.6
1963 Male, age 80, left hemisphere 39.8
2437 Female, age 94, left hemisphere 39.6
2249 Male, age 74, both hemispheres 39.1
1940 Female, age 85, left hemisphere 37.5
1892 Male, age 76, both hemispheres 25.6
Hippocampus, CA3
nTPM: 34.2
1891 Female, age 85, both hemispheres 49.7
1867 Male, age 76, both hemispheres 33.9
2620 Female, age 94, left hemisphere 33.9
2861 Female, age 67, both hemispheres 31.6
2436 Male, age 74, both hemispheres 30.1
2137 Male, age 80, left hemisphere 26.0
Parahippocampal cortex
nTPM: 39.8
2692 Male, age 74, both hemispheres 55.7
2532 Female, age 72, left hemisphere 44.7
1990 Female, age 91, right hemisphere 43.3
2018 Male, age 76, both hemispheres 39.1
1850 Male, age 80, both hemispheres 38.5
2622 Female, age 67, right hemisphere 38.4
2245 Female, age 91, both hemispheres 36.6
1933 Female, age 85, both hemispheres 34.9
2693 Female, age 94, both hemispheres 34.8
2250 Female, age 67, right hemisphere 32.0
Perirhinal gyrus
nTPM: 32.4
2521 Female, age 94, right hemisphere 33.9
1794 Male, age 80, right hemisphere 33.8
2848 Male, age 76, right hemisphere 33.5
1847 Female, age 91, left hemisphere 31.0
1841 Female, age 85, right hemisphere 29.7
Subiculum
nTPM: 47.0
2619 Male, age 74, both hemispheres 50.2
2438 Female, age 94, left hemisphere 50.0
2042 Male, age 76, both hemispheres 49.7
1901 Male, age 80, both hemispheres 46.3
2729 Female, age 91, right hemisphere 43.8
1977 Female, age 85, both hemispheres 41.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.4
Samples: 197

Max nTPM: 144.7
Min nTPM: 16.6
Std nTPM: 19.0
Median nTPM: 42.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 144.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 128.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 113.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 106.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 91.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 88.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 81.5
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 80.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 80.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 80.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 78.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.1
FF:10153-102I9 76 years, female 84.8
FF:10169-103B7 60 years, female 57.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 51.5
Samples: 4

Max nTPM: 67.3
Min nTPM: 34.4
Sample A Female 58.4
Sample B Female 46.0
Sample C Male 67.3
Sample D Male 34.4
Entorhinal cortex
nTPM: 38.3
Samples: 4

Max nTPM: 39.9
Min nTPM: 36.5
Sample A Female 37.2
Sample B Female 39.9
Sample C Male 39.4
Sample D Male 36.5
Subiculum
nTPM: 46.0
Samples: 4

Max nTPM: 47.1
Min nTPM: 44.3
Sample A Female 44.3
Sample B Female 47.1
Sample C Male 45.9
Sample D Male 46.6
Ventral hippocampus
nTPM: 46.5
Samples: 4

Max nTPM: 50.8
Min nTPM: 40.0
Sample A Female 44.4
Sample B Female 40.0
Sample C Male 50.8
Sample D Male 50.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.9
Samples: 4

Max nTPM: 54.4
Min nTPM: 31.3
Sample A Male 54.4
Sample B Male 44.4
Sample C Female 41.4
Sample D Female 31.3
Hippocampal formation
nTPM: 52.8
Samples: 4

Max nTPM: 56.5
Min nTPM: 46.9
Sample A Male 46.9
Sample B Male 56.3
Sample C Female 56.5
Sample D Female 51.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
75695662 Antisense, RP_060518_04_D01, Mouse strain C57BL/6J (56 days, male) 12.2
73906077 Antisense, RP_051212_04_F08, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.