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ISG15
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:42.7 nTPM
HPA:42.7 nTPM
GTEx:60.2 nTPM
FANTOM5:7.0 Scaled Tags Per Million
Pig:33.5 nTPM
Mouse:9.0 nTPM
Allen mouse:4.6 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 42.7
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 34.6
2666 Male, age 74, left hemisphere 45.7
2019 Male, age 18, unknown 40.5
1827 Male, age 72, unknown 39.0
2828 Female, age 72, unknown 37.4
2411 Female, age 72, unknown 32.5
1870 Female, age 42, unknown 32.1
1830 Male, age 51, unknown 31.6
1833 Male, age 53, unknown 30.5
2586 Male, age 75, left hemisphere 29.2
2219 Male, age 76, both hemispheres 27.7
Dorsal raphe nucleus
nTPM: 39.1
1828 Male, age 53, unknown 48.6
2750 Male, age 76, both hemispheres 42.3
2298 Female, age 72, unknown 38.5
2047 Male, age 72, unknown 33.5
2016 Female, age 72, unknown 32.6
Inferior colliculus
nTPM: 29.4
2097 Female, age 72, unknown 33.9
1848 Female, age 42, unknown 29.9
2849 Male, age 72, unknown 27.6
1890 Male, age 53, unknown 26.3
Median raphe nucleus
nTPM: 42.3
2220 Male, age 76, midline 42.3
Pedunculopontine tegmental nucleus
nTPM: 37.5
2338 Male, age 61, both hemispheres 41.8
2334 Male, age 80, both hemispheres 39.2
1921 Female, age 85, both hemispheres 31.4
Periaquaductal grey, anterior
nTPM: 42.3
2502 Female, age 75, unknown 47.7
1795 Male, age 51, unknown 45.9
1947 Male, age 18, unknown 33.4
Periaquaductal grey, dorsal
nTPM: 32.8
1831 Male, age 72, unknown 35.9
2850 Male, age 76, both hemispheres 34.0
2464 Female, age 72, unknown 33.3
1840 Male, age 53, unknown 27.9
Periaquaductal grey, lateral
nTPM: 37.3
2272 Male, age 74, both hemispheres 43.4
2140 Male, age 76, both hemispheres 34.4
2053 Male, age 18, unknown 34.3
Pretectal area
nTPM: 42.7
1816 Male, age 51, unknown 60.6
1944 Female, age 72, unknown 55.6
1817 Female, age 42, unknown 53.6
2007 Male, age 72, unknown 50.5
1815 Male, age 53, unknown 46.7
2224 Female, age 72, unknown 37.9
2667 Female, age 75, unknown 37.3
2273 Male, age 74, both hemispheres 32.8
2316 Male, age 76, right hemisphere 32.8
2825 Male, age 18, unknown 32.8
2407 Male, age 75, both hemispheres 29.1
Red nucleus
nTPM: 32.5
2785 Male, age 18, unknown 43.1
2503 Female, age 72, unknown 35.5
2588 Male, age 74, left hemisphere 34.7
2823 Male, age 76, right hemisphere 32.7
2725 Female, age 75, unknown 31.4
2769 Male, age 72, unknown 31.3
1954 Female, age 42, unknown 31.2
2227 Male, age 72, unknown 30.9
1904 Male, age 53, unknown 30.0
1865 Male, age 51, unknown 29.8
1821 Female, age 72, unknown 29.4
2584 Male, age 75, left hemisphere 29.3
Substantia nigra
nTPM: 32.4
1889 Female, age 72, unknown 43.5
1941 Male, age 53, unknown 35.8
2665 Male, age 74, both hemispheres 35.4
2409 Female, age 72, unknown 32.9
2590 Female, age 75, unknown 32.0
2583 Male, age 75, right hemisphere 31.1
1851 Male, age 51, unknown 28.9
2699 Male, age 18, unknown 28.5
2241 Male, age 72, unknown 28.4
1916 Female, age 42, unknown 27.5
Superior colliculus
nTPM: 37.9
2087 Female, age 72, unknown 49.6
1796 Male, age 53, unknown 44.1
2261 Male, age 18, unknown 43.9
1913 Female, age 42, unknown 38.2
1995 Male, age 72, unknown 36.4
2587 Male, age 74, left hemisphere 35.9
2668 Female, age 75, unknown 35.6
1839 Male, age 51, unknown 33.9
1895 Male, age 76, right hemisphere 32.7
2664 Male, age 75, both hemispheres 29.1
Ventral tegmental area
nTPM: 31.7
2218 Male, age 76, both hemispheres 38.5
2410 Female, age 72, unknown 34.7
1942 Male, age 51, unknown 30.6
2021 Male, age 53, unknown 30.0
1915 Female, age 42, unknown 29.3
2223 Female, age 72, unknown 27.1

MIDBRAIN - GTEx RNA-seqi
Average nTPM 60.2
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 60.2
Samples: 139

Max nTPM: 323.0
Min nTPM: 13.8
Std nTPM: 42.6
Median nTPM: 48.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ 60-69 years, male 323.0
GTEX-11GSP-0011-R2b-SM-9QEGE 60-69 years, female 254.9
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 186.5
GTEX-11TUW-0011-R2b-SM-DO92T 60-69 years, male 179.3
GTEX-17HG3-0011-R2a-SM-7MGVX 30-39 years, female 174.2
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 150.9
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 145.4
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 139.9
GTEX-1IL2U-0011-R2a-SM-ARU6V 60-69 years, male 132.2
GTEX-1GN73-0011-R2a-SM-CJI2V 60-69 years, male 109.8
GTEX-12WSD-0011-R2a-SM-5LZWB 60-69 years, female 107.1
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 7.0
FF:10158-103A5 76 years, female 7.0

MIDBRAIN - Pig RNA-seqi
Average nTPM 33.5
Pig sample Sample description nTPM
Midbrain
nTPM: 24.6
Samples: 4

Max nTPM: 26.3
Min nTPM: 21.9
Sample A Female 24.2
Sample B Female 26.3
Sample C Male 21.9
Sample D Male 26.1
Periaqueductal gray
nTPM: 23.7
Samples: 3

Max nTPM: 25.1
Min nTPM: 21.3
Sample B Female 24.7
Sample C Male 25.1
Sample D Male 21.3
Substantia nigra
nTPM: 33.5
Samples: 4

Max nTPM: 56.2
Min nTPM: 17.7
Sample A Female 56.2
Sample B Female 25.7
Sample C Male 34.4
Sample D Male 17.7
Superior colliculi
nTPM: 24.0
Samples: 4

Max nTPM: 30.6
Min nTPM: 18.1
Sample A Female 30.6
Sample B Female 18.1
Sample C Male 18.5
Sample D Male 28.9

MIDBRAIN - Mouse RNA-seqi
Average nTPM 9.0
Mouse sample Sample description nTPM
Midbrain
nTPM: 9.0
Samples: 4

Max nTPM: 10.9
Min nTPM: 6.6
Sample A Male 10.9
Sample B Male 9.6
Sample C Female 9.0
Sample D Female 6.6

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 4.6
68563110 Antisense, RP_050125_01_B05, Mouse strain C57BL/6J (56 days, male) 4.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.