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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:205.7 nTPM
HPA:205.7 nTPM
GTEx:197.6 nTPM
FANTOM5:56.4 Scaled Tags Per Million
Pig:82.1 nTPM
Mouse:65.6 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020998
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 205.7
Sample id Sample description nTPM
Hippocampus
nTPM: 203.2
1898 Male, age 80, left hemisphere 209.8
2529 Female, age 94, left hemisphere 205.7
2148 Female, age 91, left hemisphere 204.8
1911 Female, age 85, right hemisphere 200.8
2621 Female, age 67, right hemisphere 200.2
1855 Male, age 76, left hemisphere 197.6
Dentate gyrus
nTPM: 201.4
2010 Male, age 76, both hemispheres 208.5
2528 Male, age 74, both hemispheres 205.0
2530 Female, age 94, left hemisphere 202.5
1927 Female, age 91, both hemispheres 199.6
2246 Female, age 85, both hemispheres 196.8
2531 Female, age 67, both hemispheres 195.8
Entorhinal gyrus
nTPM: 203.0
2764 Male, age 80, right hemisphere 207.1
2117 Female, age 91, right hemisphere 206.1
1787 Male, age 76, left hemisphere 202.8
1938 Female, age 85, left hemisphere 202.2
2686 Male, age 75, right hemisphere 200.5
2613 Female, age 94, left hemisphere 199.5
Hippocampus, CA1
nTPM: 203.8
2749 Male, age 80, left hemisphere 212.8
1873 Female, age 85, both hemispheres 203.7
2527 Male, age 74, both hemispheres 203.0
2045 Male, age 76, both hemispheres 200.8
2082 Female, age 91, right hemisphere 198.7
Hippocampus, CA2
nTPM: 205.7
1963 Male, age 80, left hemisphere 217.1
1892 Male, age 76, both hemispheres 208.2
2437 Female, age 94, left hemisphere 205.6
2249 Male, age 74, both hemispheres 201.8
1940 Female, age 85, left hemisphere 201.6
2113 Female, age 91, right hemisphere 199.7
Hippocampus, CA3
nTPM: 201.7
1867 Male, age 76, both hemispheres 206.5
2137 Male, age 80, left hemisphere 204.6
1891 Female, age 85, both hemispheres 202.8
2436 Male, age 74, both hemispheres 201.0
2861 Female, age 67, both hemispheres 197.9
2620 Female, age 94, left hemisphere 197.4
Parahippocampal cortex
nTPM: 199.1
2018 Male, age 76, both hemispheres 204.7
2245 Female, age 91, both hemispheres 201.3
2692 Male, age 74, both hemispheres 200.9
1990 Female, age 91, right hemisphere 199.9
1933 Female, age 85, both hemispheres 199.5
2250 Female, age 67, right hemisphere 199.3
1850 Male, age 80, both hemispheres 197.8
2622 Female, age 67, right hemisphere 196.8
2693 Female, age 94, both hemispheres 196.2
2532 Female, age 72, left hemisphere 194.2
Perirhinal gyrus
nTPM: 197.7
1847 Female, age 91, left hemisphere 200.7
1794 Male, age 80, right hemisphere 200.0
1841 Female, age 85, right hemisphere 196.7
2521 Female, age 94, right hemisphere 196.6
2848 Male, age 76, right hemisphere 194.7
Subiculum
nTPM: 202.2
1901 Male, age 80, both hemispheres 207.0
2042 Male, age 76, both hemispheres 204.4
1977 Female, age 85, both hemispheres 203.8
2729 Female, age 91, right hemisphere 202.3
2619 Male, age 74, both hemispheres 201.6
2438 Female, age 94, left hemisphere 194.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 197.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 197.6
Samples: 197

Max nTPM: 410.2
Min nTPM: 91.1
Std nTPM: 49.5
Median nTPM: 185.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 410.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 384.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 363.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 351.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 335.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 330.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 322.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 318.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 312.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 308.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 303.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.4
FF:10169-103B7 60 years, female 64.8
FF:10153-102I9 76 years, female 48.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 82.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 82.1
Samples: 4

Max nTPM: 115.4
Min nTPM: 57.2
Sample A Female 115.4
Sample B Female 75.0
Sample C Male 80.9
Sample D Male 57.2
Entorhinal cortex
nTPM: 65.0
Samples: 4

Max nTPM: 80.7
Min nTPM: 50.0
Sample A Female 61.7
Sample B Female 80.7
Sample C Male 67.5
Sample D Male 50.0
Subiculum
nTPM: 64.4
Samples: 4

Max nTPM: 85.2
Min nTPM: 53.8
Sample A Female 85.2
Sample B Female 59.9
Sample C Male 58.5
Sample D Male 53.8
Ventral hippocampus
nTPM: 72.2
Samples: 4

Max nTPM: 82.5
Min nTPM: 57.3
Sample A Female 81.4
Sample B Female 57.3
Sample C Male 82.5
Sample D Male 67.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.3
Samples: 4

Max nTPM: 58.4
Min nTPM: 50.1
Sample A Male 54.0
Sample B Male 58.4
Sample C Female 54.5
Sample D Female 50.1
Hippocampal formation
nTPM: 65.6
Samples: 4

Max nTPM: 71.4
Min nTPM: 54.2
Sample A Male 65.8
Sample B Male 54.2
Sample C Female 71.0
Sample D Female 71.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69352814 Antisense, RP_050412_01_B11, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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