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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:13.2 nTPM
HPA:13.2 nTPM
GTEx:8.5 nTPM
FANTOM5:20.6 Scaled Tags Per Million
Pig:6.6 nTPM
Mouse:13.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063280
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.2
Sample id Sample description nTPM
Hippocampus
nTPM: 13.0
1911 Female, age 85, right hemisphere 13.6
2529 Female, age 94, left hemisphere 13.6
2621 Female, age 67, right hemisphere 12.9
1855 Male, age 76, left hemisphere 12.8
2148 Female, age 91, left hemisphere 12.8
1898 Male, age 80, left hemisphere 12.5
Dentate gyrus
nTPM: 12.9
2531 Female, age 67, both hemispheres 13.4
2530 Female, age 94, left hemisphere 13.2
1927 Female, age 91, both hemispheres 13.1
2010 Male, age 76, both hemispheres 12.8
2246 Female, age 85, both hemispheres 12.6
2528 Male, age 74, both hemispheres 12.4
Entorhinal gyrus
nTPM: 13.0
1938 Female, age 85, left hemisphere 13.3
1787 Male, age 76, left hemisphere 13.1
2686 Male, age 75, right hemisphere 13.0
2764 Male, age 80, right hemisphere 13.0
2613 Female, age 94, left hemisphere 12.8
2117 Female, age 91, right hemisphere 12.7
Hippocampus, CA1
nTPM: 12.7
2082 Female, age 91, right hemisphere 13.6
2045 Male, age 76, both hemispheres 13.1
2527 Male, age 74, both hemispheres 12.9
1873 Female, age 85, both hemispheres 12.4
2749 Male, age 80, left hemisphere 11.7
Hippocampus, CA2
nTPM: 12.3
2113 Female, age 91, right hemisphere 13.1
1940 Female, age 85, left hemisphere 12.7
2437 Female, age 94, left hemisphere 12.7
2249 Male, age 74, both hemispheres 12.0
1892 Male, age 76, both hemispheres 11.8
1963 Male, age 80, left hemisphere 11.3
Hippocampus, CA3
nTPM: 12.5
2620 Female, age 94, left hemisphere 13.8
1867 Male, age 76, both hemispheres 13.1
2436 Male, age 74, both hemispheres 12.6
2861 Female, age 67, both hemispheres 12.4
1891 Female, age 85, both hemispheres 11.9
2137 Male, age 80, left hemisphere 11.2
Parahippocampal cortex
nTPM: 12.7
2018 Male, age 76, both hemispheres 14.2
2532 Female, age 72, left hemisphere 13.5
2622 Female, age 67, right hemisphere 13.4
1990 Female, age 91, right hemisphere 13.0
1850 Male, age 80, both hemispheres 12.5
1933 Female, age 85, both hemispheres 12.5
2692 Male, age 74, both hemispheres 12.5
2250 Female, age 67, right hemisphere 12.1
2693 Female, age 94, both hemispheres 11.9
2245 Female, age 91, both hemispheres 11.6
Perirhinal gyrus
nTPM: 12.7
1847 Female, age 91, left hemisphere 13.2
1794 Male, age 80, right hemisphere 12.7
2521 Female, age 94, right hemisphere 12.7
2848 Male, age 76, right hemisphere 12.7
1841 Female, age 85, right hemisphere 12.1
Subiculum
nTPM: 13.2
2042 Male, age 76, both hemispheres 14.8
2619 Male, age 74, both hemispheres 13.5
1901 Male, age 80, both hemispheres 13.2
2729 Female, age 91, right hemisphere 12.7
2438 Female, age 94, left hemisphere 12.6
1977 Female, age 85, both hemispheres 12.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.5
Samples: 197

Max nTPM: 15.8
Min nTPM: 2.3
Std nTPM: 2.2
Median nTPM: 8.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 15.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 15.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 13.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 13.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 13.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 13.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 12.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 12.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 12.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 12.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 12.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.6
FF:10153-102I9 76 years, female 23.5
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.6
Samples: 4

Max nTPM: 7.0
Min nTPM: 6.1
Sample A Female 6.6
Sample B Female 6.8
Sample C Male 6.1
Sample D Male 7.0
Entorhinal cortex
nTPM: 6.3
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.8
Sample A Female 6.2
Sample B Female 6.0
Sample C Male 5.8
Sample D Male 7.0
Subiculum
nTPM: 6.0
Samples: 4

Max nTPM: 6.2
Min nTPM: 5.7
Sample A Female 5.7
Sample B Female 6.2
Sample C Male 5.8
Sample D Male 6.1
Ventral hippocampus
nTPM: 6.6
Samples: 4

Max nTPM: 7.0
Min nTPM: 6.0
Sample A Female 6.0
Sample B Female 6.4
Sample C Male 6.8
Sample D Male 7.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.5
Samples: 4

Max nTPM: 12.0
Min nTPM: 7.9
Sample A Male 12.0
Sample B Male 9.0
Sample C Female 8.9
Sample D Female 7.9
Hippocampal formation
nTPM: 13.9
Samples: 4

Max nTPM: 16.2
Min nTPM: 12.1
Sample A Male 12.1
Sample B Male 13.4
Sample C Female 16.2
Sample D Female 13.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68745084 Antisense, RP_050210_01_C02, Mouse strain C57BL/6J (56 days, male) 0.1

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