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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni
Consensus:952.8 nTPM
HPA:952.8 nTPM
GTEx:676.2 nTPM
FANTOM5:1211.3 Scaled Tags Per Million
Pig:328.2 nTPM
Mouse:146.3 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040520
Glial cells High
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 952.8
Sample id Sample description nTPM
Hippocampus
nTPM: 920.5
2621 Female, age 67, right hemisphere 976.7
2529 Female, age 94, left hemisphere 949.6
1898 Male, age 80, left hemisphere 940.9
1911 Female, age 85, right hemisphere 931.3
1855 Male, age 76, left hemisphere 890.9
2148 Female, age 91, left hemisphere 833.8
Dentate gyrus
nTPM: 897.8
2530 Female, age 94, left hemisphere 967.4
2528 Male, age 74, both hemispheres 933.6
2010 Male, age 76, both hemispheres 886.6
2531 Female, age 67, both hemispheres 882.0
2246 Female, age 85, both hemispheres 879.4
1927 Female, age 91, both hemispheres 838.1
Entorhinal gyrus
nTPM: 887.3
2117 Female, age 91, right hemisphere 953.1
1787 Male, age 76, left hemisphere 899.6
2764 Male, age 80, right hemisphere 882.8
1938 Female, age 85, left hemisphere 872.2
2613 Female, age 94, left hemisphere 863.7
2686 Male, age 75, right hemisphere 852.5
Hippocampus, CA1
nTPM: 861.6
2527 Male, age 74, both hemispheres 913.2
1873 Female, age 85, both hemispheres 890.2
2082 Female, age 91, right hemisphere 852.6
2045 Male, age 76, both hemispheres 832.6
2749 Male, age 80, left hemisphere 819.6
Hippocampus, CA2
nTPM: 908.4
2437 Female, age 94, left hemisphere 1002.8
2249 Male, age 74, both hemispheres 945.4
1963 Male, age 80, left hemisphere 907.2
2113 Female, age 91, right hemisphere 875.5
1940 Female, age 85, left hemisphere 875.2
1892 Male, age 76, both hemispheres 844.2
Hippocampus, CA3
nTPM: 867.4
1891 Female, age 85, both hemispheres 951.5
2436 Male, age 74, both hemispheres 925.6
1867 Male, age 76, both hemispheres 898.4
2861 Female, age 67, both hemispheres 823.7
2137 Male, age 80, left hemisphere 816.9
2620 Female, age 94, left hemisphere 788.1
Parahippocampal cortex
nTPM: 886.9
2018 Male, age 76, both hemispheres 945.9
2532 Female, age 72, left hemisphere 928.6
1990 Female, age 91, right hemisphere 915.4
2692 Male, age 74, both hemispheres 896.0
1850 Male, age 80, both hemispheres 893.7
1933 Female, age 85, both hemispheres 875.7
2245 Female, age 91, both hemispheres 873.8
2250 Female, age 67, right hemisphere 871.9
2693 Female, age 94, both hemispheres 865.4
2622 Female, age 67, right hemisphere 802.7
Perirhinal gyrus
nTPM: 872.3
2521 Female, age 94, right hemisphere 956.2
1794 Male, age 80, right hemisphere 863.8
1841 Female, age 85, right hemisphere 861.3
1847 Female, age 91, left hemisphere 844.5
2848 Male, age 76, right hemisphere 835.9
Subiculum
nTPM: 952.8
2438 Female, age 94, left hemisphere 1017.0
2042 Male, age 76, both hemispheres 1002.4
2619 Male, age 74, both hemispheres 946.0
1901 Male, age 80, both hemispheres 938.3
1977 Female, age 85, both hemispheres 926.4
2729 Female, age 91, right hemisphere 886.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 676.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 676.2
Samples: 197

Max nTPM: 1685.7
Min nTPM: 162.8
Std nTPM: 303.9
Median nTPM: 648.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 1685.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 1593.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 1574.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1524.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 1415.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1401.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1375.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 1349.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 1324.6
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 1316.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 1307.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1211.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1211.3
FF:10153-102I9 76 years, female 1272.7
FF:10169-103B7 60 years, female 1149.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 328.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 328.3
Samples: 4

Max nTPM: 548.4
Min nTPM: 86.2
Sample A Female 465.2
Sample B Female 213.2
Sample C Male 548.4
Sample D Male 86.2
Entorhinal cortex
nTPM: 72.6
Samples: 4

Max nTPM: 119.9
Min nTPM: 52.2
Sample A Female 52.2
Sample B Female 119.9
Sample C Male 59.0
Sample D Male 59.3
Subiculum
nTPM: 98.4
Samples: 4

Max nTPM: 124.5
Min nTPM: 80.3
Sample A Female 82.2
Sample B Female 124.5
Sample C Male 80.3
Sample D Male 106.4
Ventral hippocampus
nTPM: 196.6
Samples: 4

Max nTPM: 268.7
Min nTPM: 81.8
Sample A Female 226.2
Sample B Female 81.8
Sample C Male 209.7
Sample D Male 268.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 146.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 125.0
Samples: 4

Max nTPM: 140.5
Min nTPM: 106.3
Sample A Male 140.5
Sample B Male 106.3
Sample C Female 140.3
Sample D Female 113.0
Hippocampal formation
nTPM: 146.3
Samples: 4

Max nTPM: 191.8
Min nTPM: 122.1
Sample A Male 122.1
Sample B Male 131.4
Sample C Female 191.8
Sample D Female 140.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
71380893 Antisense, RP_050421_01_F01, Mouse strain C57BL/6J (56 days, male) 8.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.