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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:55.4 nTPM
HPA:55.4 nTPM
GTEx:67.6 nTPM
FANTOM5:104.6 Scaled Tags Per Million
Pig:62.2 nTPM
Mouse:99.0 nTPM
Allen mouse:14.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000843
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.4
Sample id Sample description nTPM
Hippocampus
nTPM: 53.8
1855 Male, age 76, left hemisphere 60.9
1898 Male, age 80, left hemisphere 55.8
2529 Female, age 94, left hemisphere 54.1
2621 Female, age 67, right hemisphere 52.7
2148 Female, age 91, left hemisphere 50.6
1911 Female, age 85, right hemisphere 48.5
Dentate gyrus
nTPM: 52.3
2010 Male, age 76, both hemispheres 68.7
2530 Female, age 94, left hemisphere 57.3
2246 Female, age 85, both hemispheres 49.1
1927 Female, age 91, both hemispheres 48.3
2531 Female, age 67, both hemispheres 47.3
2528 Male, age 74, both hemispheres 43.4
Entorhinal gyrus
nTPM: 55.4
1787 Male, age 76, left hemisphere 62.1
2686 Male, age 75, right hemisphere 58.2
2117 Female, age 91, right hemisphere 55.0
1938 Female, age 85, left hemisphere 54.9
2764 Male, age 80, right hemisphere 51.9
2613 Female, age 94, left hemisphere 50.4
Hippocampus, CA1
nTPM: 55.1
2045 Male, age 76, both hemispheres 65.4
2749 Male, age 80, left hemisphere 61.4
2527 Male, age 74, both hemispheres 51.8
1873 Female, age 85, both hemispheres 49.5
2082 Female, age 91, right hemisphere 47.4
Hippocampus, CA2
nTPM: 50.6
1963 Male, age 80, left hemisphere 54.1
2437 Female, age 94, left hemisphere 53.3
1892 Male, age 76, both hemispheres 51.1
1940 Female, age 85, left hemisphere 50.0
2113 Female, age 91, right hemisphere 47.7
2249 Male, age 74, both hemispheres 47.3
Hippocampus, CA3
nTPM: 50.9
1867 Male, age 76, both hemispheres 60.5
2137 Male, age 80, left hemisphere 52.4
2861 Female, age 67, both hemispheres 51.4
1891 Female, age 85, both hemispheres 48.7
2436 Male, age 74, both hemispheres 47.7
2620 Female, age 94, left hemisphere 44.8
Parahippocampal cortex
nTPM: 54.4
2018 Male, age 76, both hemispheres 79.4
2245 Female, age 91, both hemispheres 54.3
2532 Female, age 72, left hemisphere 53.2
1933 Female, age 85, both hemispheres 52.5
1850 Male, age 80, both hemispheres 51.8
2692 Male, age 74, both hemispheres 51.6
1990 Female, age 91, right hemisphere 51.0
2622 Female, age 67, right hemisphere 50.7
2693 Female, age 94, both hemispheres 50.5
2250 Female, age 67, right hemisphere 49.0
Perirhinal gyrus
nTPM: 52.5
1794 Male, age 80, right hemisphere 55.8
1847 Female, age 91, left hemisphere 52.9
2521 Female, age 94, right hemisphere 52.8
2848 Male, age 76, right hemisphere 50.6
1841 Female, age 85, right hemisphere 50.3
Subiculum
nTPM: 54.6
2042 Male, age 76, both hemispheres 65.7
2438 Female, age 94, left hemisphere 58.4
1901 Male, age 80, both hemispheres 52.0
1977 Female, age 85, both hemispheres 51.9
2619 Male, age 74, both hemispheres 51.2
2729 Female, age 91, right hemisphere 48.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 67.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.6
Samples: 197

Max nTPM: 311.1
Min nTPM: 30.4
Std nTPM: 26.6
Median nTPM: 62.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 311.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 194.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 149.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 143.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 114.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 114.0
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 108.7
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 106.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 104.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 102.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 101.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 104.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 104.6
FF:10153-102I9 76 years, female 125.6
FF:10169-103B7 60 years, female 83.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 62.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.1
Samples: 4

Max nTPM: 67.1
Min nTPM: 42.4
Sample A Female 67.1
Sample B Female 58.9
Sample C Male 55.9
Sample D Male 42.4
Entorhinal cortex
nTPM: 50.6
Samples: 4

Max nTPM: 56.9
Min nTPM: 43.1
Sample A Female 51.0
Sample B Female 56.9
Sample C Male 51.2
Sample D Male 43.1
Subiculum
nTPM: 62.2
Samples: 4

Max nTPM: 83.1
Min nTPM: 46.8
Sample A Female 83.1
Sample B Female 57.5
Sample C Male 61.4
Sample D Male 46.8
Ventral hippocampus
nTPM: 58.0
Samples: 4

Max nTPM: 76.1
Min nTPM: 49.2
Sample A Female 55.0
Sample B Female 49.2
Sample C Male 76.1
Sample D Male 51.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.6
Samples: 4

Max nTPM: 103.2
Min nTPM: 79.6
Sample A Male 100.2
Sample B Male 103.2
Sample C Female 99.2
Sample D Female 79.6
Hippocampal formation
nTPM: 99.0
Samples: 4

Max nTPM: 108.8
Min nTPM: 89.9
Sample A Male 108.8
Sample B Male 89.9
Sample C Female 97.2
Sample D Female 100.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.7
70431343 Antisense, RP_050614_02_F06, Mouse strain C57BL/6J (56 days, male) 14.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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