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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:64.9 nTPM
HPA:64.9 nTPM
GTEx:75.6 nTPM
FANTOM5:224.9 Scaled Tags Per Million
Pig:65.5 nTPM
Mouse:118.4 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031970
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.9
Sample id Sample description nTPM
Hippocampus
nTPM: 22.6
1898 Male, age 80, left hemisphere 40.2
2148 Female, age 91, left hemisphere 24.2
2621 Female, age 67, right hemisphere 23.4
1855 Male, age 76, left hemisphere 18.4
1911 Female, age 85, right hemisphere 17.1
2529 Female, age 94, left hemisphere 12.3
Dentate gyrus
nTPM: 29.3
1927 Female, age 91, both hemispheres 55.5
2531 Female, age 67, both hemispheres 28.0
2246 Female, age 85, both hemispheres 27.3
2010 Male, age 76, both hemispheres 23.6
2528 Male, age 74, both hemispheres 21.7
2530 Female, age 94, left hemisphere 19.8
Entorhinal gyrus
nTPM: 34.3
1938 Female, age 85, left hemisphere 49.0
2764 Male, age 80, right hemisphere 43.8
2613 Female, age 94, left hemisphere 40.7
1787 Male, age 76, left hemisphere 40.3
2686 Male, age 75, right hemisphere 19.4
2117 Female, age 91, right hemisphere 12.6
Hippocampus, CA1
nTPM: 35.4
2749 Male, age 80, left hemisphere 65.6
1873 Female, age 85, both hemispheres 32.2
2082 Female, age 91, right hemisphere 29.3
2045 Male, age 76, both hemispheres 25.8
2527 Male, age 74, both hemispheres 24.2
Hippocampus, CA2
nTPM: 30.0
1892 Male, age 76, both hemispheres 43.7
1963 Male, age 80, left hemisphere 33.1
1940 Female, age 85, left hemisphere 31.2
2113 Female, age 91, right hemisphere 26.1
2437 Female, age 94, left hemisphere 23.5
2249 Male, age 74, both hemispheres 22.4
Hippocampus, CA3
nTPM: 35.9
2137 Male, age 80, left hemisphere 60.4
2620 Female, age 94, left hemisphere 47.7
2436 Male, age 74, both hemispheres 35.7
1867 Male, age 76, both hemispheres 28.4
2861 Female, age 67, both hemispheres 24.2
1891 Female, age 85, both hemispheres 19.2
Parahippocampal cortex
nTPM: 36.9
1850 Male, age 80, both hemispheres 59.6
1990 Female, age 91, right hemisphere 47.6
2245 Female, age 91, both hemispheres 47.1
2693 Female, age 94, both hemispheres 39.6
2250 Female, age 67, right hemisphere 39.4
1933 Female, age 85, both hemispheres 38.2
2532 Female, age 72, left hemisphere 35.6
2622 Female, age 67, right hemisphere 24.7
2018 Male, age 76, both hemispheres 22.2
2692 Male, age 74, both hemispheres 14.7
Perirhinal gyrus
nTPM: 64.9
1847 Female, age 91, left hemisphere 80.1
1794 Male, age 80, right hemisphere 76.0
1841 Female, age 85, right hemisphere 64.1
2521 Female, age 94, right hemisphere 57.4
2848 Male, age 76, right hemisphere 46.9
Subiculum
nTPM: 20.7
1977 Female, age 85, both hemispheres 37.6
1901 Male, age 80, both hemispheres 30.7
2438 Female, age 94, left hemisphere 17.3
2619 Male, age 74, both hemispheres 14.1
2042 Male, age 76, both hemispheres 13.1
2729 Female, age 91, right hemisphere 11.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.6
Samples: 197

Max nTPM: 250.5
Min nTPM: 10.6
Std nTPM: 40.5
Median nTPM: 71.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 250.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 243.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 174.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 172.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 155.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 148.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 146.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 143.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 140.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 139.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 138.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 224.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 224.9
FF:10169-103B7 60 years, female 281.4
FF:10153-102I9 76 years, female 168.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 65.2
Samples: 4

Max nTPM: 85.0
Min nTPM: 50.8
Sample A Female 85.0
Sample B Female 73.5
Sample C Male 51.5
Sample D Male 50.8
Entorhinal cortex
nTPM: 56.7
Samples: 4

Max nTPM: 60.0
Min nTPM: 51.8
Sample A Female 59.4
Sample B Female 55.7
Sample C Male 60.0
Sample D Male 51.8
Subiculum
nTPM: 60.0
Samples: 4

Max nTPM: 79.0
Min nTPM: 46.7
Sample A Female 79.0
Sample B Female 51.4
Sample C Male 62.7
Sample D Male 46.7
Ventral hippocampus
nTPM: 65.5
Samples: 4

Max nTPM: 76.8
Min nTPM: 45.6
Sample A Female 66.2
Sample B Female 45.6
Sample C Male 76.8
Sample D Male 73.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 118.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.3
Samples: 4

Max nTPM: 116.9
Min nTPM: 102.3
Sample A Male 107.8
Sample B Male 110.1
Sample C Female 102.3
Sample D Female 116.9
Hippocampal formation
nTPM: 118.4
Samples: 4

Max nTPM: 128.2
Min nTPM: 105.9
Sample A Male 117.5
Sample B Male 121.9
Sample C Female 128.2
Sample D Female 105.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
393194 Antisense, RP_040804_02_C02, Mouse strain C57BL/6J (56 days, male) 13.7

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