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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:21.0 nTPM
HPA:21.0 nTPM
GTEx:23.7 nTPM
FANTOM5:63.6 Scaled Tags Per Million
Pig:4.0 nTPM
Mouse:14.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065996
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.0
Sample id Sample description nTPM
Hippocampus
nTPM: 18.4
2148 Female, age 91, left hemisphere 20.0
1911 Female, age 85, right hemisphere 19.4
2621 Female, age 67, right hemisphere 19.2
2529 Female, age 94, left hemisphere 18.9
1898 Male, age 80, left hemisphere 16.9
1855 Male, age 76, left hemisphere 16.2
Dentate gyrus
nTPM: 18.4
2531 Female, age 67, both hemispheres 21.0
1927 Female, age 91, both hemispheres 19.8
2246 Female, age 85, both hemispheres 18.8
2528 Male, age 74, both hemispheres 17.8
2530 Female, age 94, left hemisphere 16.6
2010 Male, age 76, both hemispheres 16.2
Entorhinal gyrus
nTPM: 20.3
2613 Female, age 94, left hemisphere 23.2
2686 Male, age 75, right hemisphere 22.1
2764 Male, age 80, right hemisphere 20.8
1787 Male, age 76, left hemisphere 19.2
1938 Female, age 85, left hemisphere 18.3
2117 Female, age 91, right hemisphere 18.3
Hippocampus, CA1
nTPM: 19.9
2749 Male, age 80, left hemisphere 23.1
2082 Female, age 91, right hemisphere 20.6
2527 Male, age 74, both hemispheres 20.5
2045 Male, age 76, both hemispheres 18.5
1873 Female, age 85, both hemispheres 16.9
Hippocampus, CA2
nTPM: 18.5
2113 Female, age 91, right hemisphere 20.4
2249 Male, age 74, both hemispheres 18.8
2437 Female, age 94, left hemisphere 18.5
1892 Male, age 76, both hemispheres 18.2
1940 Female, age 85, left hemisphere 17.7
1963 Male, age 80, left hemisphere 17.3
Hippocampus, CA3
nTPM: 21.0
2137 Male, age 80, left hemisphere 28.2
2620 Female, age 94, left hemisphere 23.0
2861 Female, age 67, both hemispheres 20.3
1867 Male, age 76, both hemispheres 18.6
2436 Male, age 74, both hemispheres 18.1
1891 Female, age 85, both hemispheres 18.0
Parahippocampal cortex
nTPM: 20.2
2245 Female, age 91, both hemispheres 22.9
2622 Female, age 67, right hemisphere 22.9
2693 Female, age 94, both hemispheres 22.8
2692 Male, age 74, both hemispheres 20.5
2250 Female, age 67, right hemisphere 20.1
1990 Female, age 91, right hemisphere 19.6
2532 Female, age 72, left hemisphere 19.2
1933 Female, age 85, both hemispheres 18.2
2018 Male, age 76, both hemispheres 18.2
1850 Male, age 80, both hemispheres 17.8
Perirhinal gyrus
nTPM: 19.1
2848 Male, age 76, right hemisphere 20.4
2521 Female, age 94, right hemisphere 19.5
1847 Female, age 91, left hemisphere 18.9
1794 Male, age 80, right hemisphere 18.5
1841 Female, age 85, right hemisphere 17.9
Subiculum
nTPM: 19.0
1901 Male, age 80, both hemispheres 20.5
2619 Male, age 74, both hemispheres 19.5
2729 Female, age 91, right hemisphere 19.0
1977 Female, age 85, both hemispheres 18.8
2042 Male, age 76, both hemispheres 18.1
2438 Female, age 94, left hemisphere 17.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.7
Samples: 197

Max nTPM: 56.2
Min nTPM: 5.2
Std nTPM: 8.5
Median nTPM: 22.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 56.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 49.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 49.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 48.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 45.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 45.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 44.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 44.3
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 43.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 38.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 38.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.6
FF:10169-103B7 60 years, female 70.1
FF:10153-102I9 76 years, female 57.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.0
Samples: 4

Max nTPM: 3.2
Min nTPM: 2.8
Sample A Female 2.9
Sample B Female 3.2
Sample C Male 2.8
Sample D Male 2.9
Entorhinal cortex
nTPM: 4.0
Samples: 4

Max nTPM: 4.2
Min nTPM: 3.8
Sample A Female 4.0
Sample B Female 3.8
Sample C Male 4.2
Sample D Male 4.1
Subiculum
nTPM: 3.7
Samples: 4

Max nTPM: 4.1
Min nTPM: 3.3
Sample A Female 4.1
Sample B Female 3.5
Sample C Male 3.9
Sample D Male 3.3
Ventral hippocampus
nTPM: 3.3
Samples: 4

Max nTPM: 3.7
Min nTPM: 3.0
Sample A Female 3.0
Sample B Female 3.2
Sample C Male 3.7
Sample D Male 3.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 16.5
Min nTPM: 13.1
Sample A Male 13.1
Sample B Male 13.2
Sample C Female 13.5
Sample D Female 16.5
Hippocampal formation
nTPM: 11.6
Samples: 4

Max nTPM: 11.9
Min nTPM: 11.1
Sample A Male 11.5
Sample B Male 11.8
Sample C Female 11.9
Sample D Female 11.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68845251 Antisense, RP_050224_01_D08, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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