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NCOR2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:61.3 nTPM
HPA:61.3 nTPM
GTEx:43.1 nTPM
FANTOM5:57.4 Scaled Tags Per Million
Pig:37.6 nTPM
Mouse:38.0 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001928
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.3
Sample id Sample description nTPM
Hippocampus
nTPM: 45.1
2148 Female, age 91, left hemisphere 68.8
2621 Female, age 67, right hemisphere 62.1
2529 Female, age 94, left hemisphere 42.0
1898 Male, age 80, left hemisphere 33.5
1911 Female, age 85, right hemisphere 33.0
1855 Male, age 76, left hemisphere 31.5
Dentate gyrus
nTPM: 47.0
2531 Female, age 67, both hemispheres 98.9
1927 Female, age 91, both hemispheres 54.4
2530 Female, age 94, left hemisphere 47.4
2246 Female, age 85, both hemispheres 34.2
2010 Male, age 76, both hemispheres 25.7
2528 Male, age 74, both hemispheres 21.7
Entorhinal gyrus
nTPM: 22.2
2686 Male, age 75, right hemisphere 33.4
2613 Female, age 94, left hemisphere 31.8
2764 Male, age 80, right hemisphere 27.5
2117 Female, age 91, right hemisphere 18.4
1938 Female, age 85, left hemisphere 16.3
1787 Male, age 76, left hemisphere 5.7
Hippocampus, CA1
nTPM: 35.7
2749 Male, age 80, left hemisphere 49.1
2082 Female, age 91, right hemisphere 35.1
2045 Male, age 76, both hemispheres 32.8
1873 Female, age 85, both hemispheres 32.2
2527 Male, age 74, both hemispheres 29.4
Hippocampus, CA2
nTPM: 28.3
2437 Female, age 94, left hemisphere 52.0
1892 Male, age 76, both hemispheres 33.3
2113 Female, age 91, right hemisphere 33.0
1963 Male, age 80, left hemisphere 30.1
1940 Female, age 85, left hemisphere 21.2
2249 Male, age 74, both hemispheres 0.5
Hippocampus, CA3
nTPM: 61.3
2620 Female, age 94, left hemisphere 123.5
2861 Female, age 67, both hemispheres 109.7
2137 Male, age 80, left hemisphere 70.8
1867 Male, age 76, both hemispheres 28.6
2436 Male, age 74, both hemispheres 17.8
1891 Female, age 85, both hemispheres 17.4
Parahippocampal cortex
nTPM: 21.2
2245 Female, age 91, both hemispheres 43.0
2622 Female, age 67, right hemisphere 39.6
2693 Female, age 94, both hemispheres 27.7
2532 Female, age 72, left hemisphere 26.8
2692 Male, age 74, both hemispheres 23.1
2018 Male, age 76, both hemispheres 17.3
1933 Female, age 85, both hemispheres 14.9
2250 Female, age 67, right hemisphere 9.0
1990 Female, age 91, right hemisphere 5.6
1850 Male, age 80, both hemispheres 4.8
Perirhinal gyrus
nTPM: 9.0
2521 Female, age 94, right hemisphere 18.9
1794 Male, age 80, right hemisphere 12.0
1847 Female, age 91, left hemisphere 8.6
2848 Male, age 76, right hemisphere 5.8
1841 Female, age 85, right hemisphere 0.0
Subiculum
nTPM: 25.1
1901 Male, age 80, both hemispheres 43.1
2729 Female, age 91, right hemisphere 30.6
2042 Male, age 76, both hemispheres 26.5
2619 Male, age 74, both hemispheres 21.5
2438 Female, age 94, left hemisphere 20.8
1977 Female, age 85, both hemispheres 8.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.1
Samples: 197

Max nTPM: 88.0
Min nTPM: 7.5
Std nTPM: 10.5
Median nTPM: 42.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 88.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 81.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 71.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 68.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 67.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 65.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 63.1
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 62.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 60.8
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 60.0
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 59.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.4
FF:10153-102I9 76 years, female 73.0
FF:10169-103B7 60 years, female 41.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.6
Samples: 4

Max nTPM: 39.8
Min nTPM: 29.2
Sample A Female 39.8
Sample B Female 38.4
Sample C Male 39.0
Sample D Male 29.2
Entorhinal cortex
nTPM: 31.9
Samples: 4

Max nTPM: 34.8
Min nTPM: 27.9
Sample A Female 34.8
Sample B Female 27.9
Sample C Male 32.0
Sample D Male 33.0
Subiculum
nTPM: 32.5
Samples: 4

Max nTPM: 40.2
Min nTPM: 27.8
Sample A Female 40.2
Sample B Female 27.8
Sample C Male 33.8
Sample D Male 28.3
Ventral hippocampus
nTPM: 37.7
Samples: 4

Max nTPM: 48.4
Min nTPM: 27.8
Sample A Female 31.3
Sample B Female 27.8
Sample C Male 48.4
Sample D Male 43.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.9
Samples: 4

Max nTPM: 40.0
Min nTPM: 27.5
Sample A Male 33.8
Sample B Male 27.5
Sample C Female 30.4
Sample D Female 40.0
Hippocampal formation
nTPM: 38.0
Samples: 4

Max nTPM: 49.2
Min nTPM: 19.3
Sample A Male 19.3
Sample B Male 45.9
Sample C Female 49.2
Sample D Female 37.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
69782091 Antisense, RP_050505_02_C09, Mouse strain C57BL/6J (56 days, male) 5.8

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