ABOUTMENU
HELP
NEWS
MRTFA
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:20.2 nTPM
HPA:20.2 nTPM
GTEx:17.8 nTPM
FANTOM5:53.5 Scaled Tags Per Million
Pig:20.3 nTPM
Mouse:27.9 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030782
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.2
Sample id Sample description nTPM
Hippocampus
nTPM: 16.1
2621 Female, age 67, right hemisphere 19.7
1855 Male, age 76, left hemisphere 18.4
2148 Female, age 91, left hemisphere 16.4
1898 Male, age 80, left hemisphere 14.9
1911 Female, age 85, right hemisphere 14.7
2529 Female, age 94, left hemisphere 12.4
Dentate gyrus
nTPM: 17.0
1927 Female, age 91, both hemispheres 26.4
2531 Female, age 67, both hemispheres 18.6
2010 Male, age 76, both hemispheres 18.5
2246 Female, age 85, both hemispheres 14.6
2530 Female, age 94, left hemisphere 14.3
2528 Male, age 74, both hemispheres 9.4
Entorhinal gyrus
nTPM: 18.0
2613 Female, age 94, left hemisphere 24.4
2764 Male, age 80, right hemisphere 20.1
1938 Female, age 85, left hemisphere 19.3
2686 Male, age 75, right hemisphere 19.0
1787 Male, age 76, left hemisphere 16.7
2117 Female, age 91, right hemisphere 8.4
Hippocampus, CA1
nTPM: 20.2
2749 Male, age 80, left hemisphere 31.4
2045 Male, age 76, both hemispheres 23.2
1873 Female, age 85, both hemispheres 17.8
2082 Female, age 91, right hemisphere 16.9
2527 Male, age 74, both hemispheres 11.5
Hippocampus, CA2
nTPM: 14.1
1963 Male, age 80, left hemisphere 18.7
1892 Male, age 76, both hemispheres 17.6
2113 Female, age 91, right hemisphere 14.4
1940 Female, age 85, left hemisphere 14.1
2437 Female, age 94, left hemisphere 11.6
2249 Male, age 74, both hemispheres 8.4
Hippocampus, CA3
nTPM: 17.9
2137 Male, age 80, left hemisphere 29.9
2620 Female, age 94, left hemisphere 19.8
2861 Female, age 67, both hemispheres 19.8
1867 Male, age 76, both hemispheres 14.4
1891 Female, age 85, both hemispheres 12.5
2436 Male, age 74, both hemispheres 11.2
Parahippocampal cortex
nTPM: 16.6
2693 Female, age 94, both hemispheres 20.8
2245 Female, age 91, both hemispheres 20.2
2622 Female, age 67, right hemisphere 18.3
2532 Female, age 72, left hemisphere 16.9
2018 Male, age 76, both hemispheres 16.7
1933 Female, age 85, both hemispheres 16.6
1850 Male, age 80, both hemispheres 16.0
1990 Female, age 91, right hemisphere 14.7
2250 Female, age 67, right hemisphere 14.1
2692 Male, age 74, both hemispheres 11.4
Perirhinal gyrus
nTPM: 19.2
1847 Female, age 91, left hemisphere 21.8
2521 Female, age 94, right hemisphere 19.4
1794 Male, age 80, right hemisphere 18.4
1841 Female, age 85, right hemisphere 18.4
2848 Male, age 76, right hemisphere 17.9
Subiculum
nTPM: 13.7
1901 Male, age 80, both hemispheres 17.0
1977 Female, age 85, both hemispheres 16.7
2729 Female, age 91, right hemisphere 13.7
2042 Male, age 76, both hemispheres 13.5
2438 Female, age 94, left hemisphere 11.7
2619 Male, age 74, both hemispheres 9.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.8
Samples: 197

Max nTPM: 33.8
Min nTPM: 7.7
Std nTPM: 6.0
Median nTPM: 17.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 33.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 32.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 32.1
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 30.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 30.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 30.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 30.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 30.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 29.8
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 29.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 29.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.5
FF:10169-103B7 60 years, female 55.4
FF:10153-102I9 76 years, female 51.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.9
Samples: 4

Max nTPM: 22.9
Min nTPM: 14.4
Sample A Female 22.0
Sample B Female 22.9
Sample C Male 14.4
Sample D Male 20.2
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 15.9
Min nTPM: 12.0
Sample A Female 15.2
Sample B Female 12.0
Sample C Male 15.9
Sample D Male 14.0
Subiculum
nTPM: 14.3
Samples: 4

Max nTPM: 17.5
Min nTPM: 11.2
Sample A Female 17.5
Sample B Female 12.3
Sample C Male 16.0
Sample D Male 11.2
Ventral hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 25.1
Min nTPM: 14.1
Sample A Female 19.7
Sample B Female 14.1
Sample C Male 25.1
Sample D Male 22.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.7
Samples: 4

Max nTPM: 25.3
Min nTPM: 18.5
Sample A Male 21.0
Sample B Male 18.5
Sample C Female 21.9
Sample D Female 25.3
Hippocampal formation
nTPM: 27.9
Samples: 4

Max nTPM: 32.3
Min nTPM: 21.3
Sample A Male 21.3
Sample B Male 29.7
Sample C Female 32.3
Sample D Female 28.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
70593310 Antisense, RP_050407_03_A10, Mouse strain C57BL/6J (56 days, male) 5.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.