ABOUTMENU
HELP
NEWS
TLE1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:41.2 nTPM
HPA:41.2 nTPM
GTEx:39.8 nTPM
FANTOM5:49.4 Scaled Tags Per Million
Pig:23.9 nTPM
Mouse:35.1 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011482
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.2
Sample id Sample description nTPM
Hippocampus
nTPM: 39.6
2529 Female, age 94, left hemisphere 45.5
1911 Female, age 85, right hemisphere 44.1
1855 Male, age 76, left hemisphere 40.8
2621 Female, age 67, right hemisphere 38.9
1898 Male, age 80, left hemisphere 34.3
2148 Female, age 91, left hemisphere 33.7
Dentate gyrus
nTPM: 37.0
2531 Female, age 67, both hemispheres 43.9
2246 Female, age 85, both hemispheres 38.1
1927 Female, age 91, both hemispheres 37.5
2010 Male, age 76, both hemispheres 36.4
2530 Female, age 94, left hemisphere 33.4
2528 Male, age 74, both hemispheres 32.6
Entorhinal gyrus
nTPM: 27.8
1787 Male, age 76, left hemisphere 33.9
2686 Male, age 75, right hemisphere 29.3
2764 Male, age 80, right hemisphere 27.8
2117 Female, age 91, right hemisphere 27.4
1938 Female, age 85, left hemisphere 25.7
2613 Female, age 94, left hemisphere 22.4
Hippocampus, CA1
nTPM: 40.5
2749 Male, age 80, left hemisphere 49.4
2045 Male, age 76, both hemispheres 43.9
1873 Female, age 85, both hemispheres 39.3
2527 Male, age 74, both hemispheres 38.7
2082 Female, age 91, right hemisphere 31.1
Hippocampus, CA2
nTPM: 35.4
1963 Male, age 80, left hemisphere 42.5
1940 Female, age 85, left hemisphere 35.6
1892 Male, age 76, both hemispheres 35.4
2437 Female, age 94, left hemisphere 35.4
2113 Female, age 91, right hemisphere 32.1
2249 Male, age 74, both hemispheres 31.5
Hippocampus, CA3
nTPM: 41.2
2137 Male, age 80, left hemisphere 55.3
2861 Female, age 67, both hemispheres 46.9
2620 Female, age 94, left hemisphere 43.8
1867 Male, age 76, both hemispheres 38.6
1891 Female, age 85, both hemispheres 34.2
2436 Male, age 74, both hemispheres 28.3
Parahippocampal cortex
nTPM: 31.8
2245 Female, age 91, both hemispheres 37.1
2250 Female, age 67, right hemisphere 36.7
2018 Male, age 76, both hemispheres 34.8
2622 Female, age 67, right hemisphere 33.6
1933 Female, age 85, both hemispheres 32.0
2532 Female, age 72, left hemisphere 30.1
2692 Male, age 74, both hemispheres 29.7
1850 Male, age 80, both hemispheres 29.5
2693 Female, age 94, both hemispheres 29.1
1990 Female, age 91, right hemisphere 25.6
Perirhinal gyrus
nTPM: 34.6
2521 Female, age 94, right hemisphere 40.3
1841 Female, age 85, right hemisphere 37.8
1794 Male, age 80, right hemisphere 36.8
1847 Female, age 91, left hemisphere 29.8
2848 Male, age 76, right hemisphere 28.3
Subiculum
nTPM: 33.5
2438 Female, age 94, left hemisphere 40.5
2619 Male, age 74, both hemispheres 34.6
1901 Male, age 80, both hemispheres 33.0
2729 Female, age 91, right hemisphere 32.1
2042 Male, age 76, both hemispheres 30.9
1977 Female, age 85, both hemispheres 30.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.8
Samples: 197

Max nTPM: 73.6
Min nTPM: 15.2
Std nTPM: 12.4
Median nTPM: 38.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 73.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 70.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 70.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 68.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 67.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 66.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 65.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 65.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 64.2
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 63.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 62.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.4
FF:10153-102I9 76 years, female 66.5
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.0
Samples: 4

Max nTPM: 29.0
Min nTPM: 16.2
Sample A Female 29.0
Sample B Female 25.1
Sample C Male 16.2
Sample D Male 25.5
Entorhinal cortex
nTPM: 22.5
Samples: 4

Max nTPM: 24.1
Min nTPM: 20.9
Sample A Female 24.1
Sample B Female 21.6
Sample C Male 23.5
Sample D Male 20.9
Subiculum
nTPM: 20.5
Samples: 4

Max nTPM: 25.7
Min nTPM: 17.6
Sample A Female 25.7
Sample B Female 20.9
Sample C Male 17.6
Sample D Male 17.7
Ventral hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 21.5
Min nTPM: 18.6
Sample A Female 18.6
Sample B Female 19.8
Sample C Male 21.5
Sample D Male 21.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 23.1
Min nTPM: 21.0
Sample A Male 23.1
Sample B Male 22.5
Sample C Female 21.2
Sample D Female 21.0
Hippocampal formation
nTPM: 35.1
Samples: 4

Max nTPM: 44.0
Min nTPM: 29.0
Sample A Male 30.7
Sample B Male 36.6
Sample C Female 44.0
Sample D Female 29.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
1061 Antisense, RP_Baylor_103078, Mouse strain C57BL/6J (56 days, male) 2.4
1062 Antisense, RP_Baylor_103078, Mouse strain C57BL/6J (56 days, male) 1.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.