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FAM3C
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:33.8 nTPM
HPA:33.8 nTPM
GTEx:37.9 nTPM
FANTOM5:97.0 Scaled Tags Per Million
Pig:50.6 nTPM
Mouse:43.1 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043376Antibody HPA050548
Glial cells Not detectedNot detected
Neuronal cells HighHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.8
Sample id Sample description nTPM
Hippocampus
nTPM: 21.7
1898 Male, age 80, left hemisphere 34.4
1855 Male, age 76, left hemisphere 25.9
2621 Female, age 67, right hemisphere 19.7
2148 Female, age 91, left hemisphere 17.6
1911 Female, age 85, right hemisphere 16.9
2529 Female, age 94, left hemisphere 15.9
Dentate gyrus
nTPM: 23.0
1927 Female, age 91, both hemispheres 29.0
2010 Male, age 76, both hemispheres 24.8
2530 Female, age 94, left hemisphere 22.5
2528 Male, age 74, both hemispheres 21.6
2246 Female, age 85, both hemispheres 21.5
2531 Female, age 67, both hemispheres 18.6
Entorhinal gyrus
nTPM: 21.9
1938 Female, age 85, left hemisphere 29.2
1787 Male, age 76, left hemisphere 24.7
2613 Female, age 94, left hemisphere 24.3
2764 Male, age 80, right hemisphere 22.5
2686 Male, age 75, right hemisphere 17.6
2117 Female, age 91, right hemisphere 12.8
Hippocampus, CA1
nTPM: 23.9
2749 Male, age 80, left hemisphere 31.8
1873 Female, age 85, both hemispheres 30.0
2045 Male, age 76, both hemispheres 24.5
2527 Male, age 74, both hemispheres 19.3
2082 Female, age 91, right hemisphere 14.0
Hippocampus, CA2
nTPM: 23.0
1892 Male, age 76, both hemispheres 31.0
1963 Male, age 80, left hemisphere 27.0
1940 Female, age 85, left hemisphere 26.4
2437 Female, age 94, left hemisphere 20.2
2249 Male, age 74, both hemispheres 18.0
2113 Female, age 91, right hemisphere 15.8
Hippocampus, CA3
nTPM: 22.1
2137 Male, age 80, left hemisphere 27.2
1867 Male, age 76, both hemispheres 25.1
2620 Female, age 94, left hemisphere 22.9
2861 Female, age 67, both hemispheres 21.2
1891 Female, age 85, both hemispheres 19.5
2436 Male, age 74, both hemispheres 16.6
Parahippocampal cortex
nTPM: 24.2
1850 Male, age 80, both hemispheres 35.3
1990 Female, age 91, right hemisphere 30.4
1933 Female, age 85, both hemispheres 26.5
2693 Female, age 94, both hemispheres 26.3
2532 Female, age 72, left hemisphere 23.9
2245 Female, age 91, both hemispheres 23.8
2250 Female, age 67, right hemisphere 21.4
2018 Male, age 76, both hemispheres 21.2
2692 Male, age 74, both hemispheres 17.5
2622 Female, age 67, right hemisphere 15.2
Perirhinal gyrus
nTPM: 33.8
1841 Female, age 85, right hemisphere 40.1
1794 Male, age 80, right hemisphere 35.6
1847 Female, age 91, left hemisphere 32.8
2521 Female, age 94, right hemisphere 31.8
2848 Male, age 76, right hemisphere 28.8
Subiculum
nTPM: 17.7
1977 Female, age 85, both hemispheres 23.2
1901 Male, age 80, both hemispheres 19.9
2438 Female, age 94, left hemisphere 18.9
2729 Female, age 91, right hemisphere 15.4
2042 Male, age 76, both hemispheres 14.5
2619 Male, age 74, both hemispheres 14.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.9
Samples: 197

Max nTPM: 124.5
Min nTPM: 12.4
Std nTPM: 19.7
Median nTPM: 32.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 124.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 122.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 102.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 92.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 91.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 89.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 89.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 81.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 79.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 73.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 72.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.0
FF:10169-103B7 60 years, female 110.9
FF:10153-102I9 76 years, female 83.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.1
Samples: 4

Max nTPM: 54.4
Min nTPM: 40.6
Sample A Female 54.4
Sample B Female 54.3
Sample C Male 46.9
Sample D Male 40.6
Entorhinal cortex
nTPM: 50.4
Samples: 4

Max nTPM: 53.8
Min nTPM: 46.2
Sample A Female 52.4
Sample B Female 53.8
Sample C Male 49.2
Sample D Male 46.2
Subiculum
nTPM: 50.7
Samples: 4

Max nTPM: 58.4
Min nTPM: 46.8
Sample A Female 58.4
Sample B Female 46.8
Sample C Male 47.8
Sample D Male 49.6
Ventral hippocampus
nTPM: 44.5
Samples: 4

Max nTPM: 57.4
Min nTPM: 37.3
Sample A Female 42.9
Sample B Female 40.4
Sample C Male 37.3
Sample D Male 57.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.1
Samples: 4

Max nTPM: 56.3
Min nTPM: 33.6
Sample A Male 40.8
Sample B Male 41.8
Sample C Female 33.6
Sample D Female 56.3
Hippocampal formation
nTPM: 35.9
Samples: 4

Max nTPM: 40.2
Min nTPM: 32.8
Sample A Male 36.5
Sample B Male 40.2
Sample C Female 34.0
Sample D Female 32.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
75259443 Antisense, RP_051214_04_D06, Mouse strain C57BL/6J (56 days, male) 0.9
75259495 Antisense, RP_051214_04_D06, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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