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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:13.8 nTPM
HPA:13.8 nTPM
GTEx:15.9 nTPM
FANTOM5:29.7 Scaled Tags Per Million
Pig:30.1 nTPM
Mouse:25.2 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053182
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.8
Sample id Sample description nTPM
Hippocampus
nTPM: 11.7
1855 Male, age 76, left hemisphere 13.4
1898 Male, age 80, left hemisphere 13.3
1911 Female, age 85, right hemisphere 12.0
2621 Female, age 67, right hemisphere 11.7
2148 Female, age 91, left hemisphere 10.5
2529 Female, age 94, left hemisphere 9.3
Dentate gyrus
nTPM: 12.1
2010 Male, age 76, both hemispheres 16.3
1927 Female, age 91, both hemispheres 14.2
2530 Female, age 94, left hemisphere 11.8
2246 Female, age 85, both hemispheres 11.3
2531 Female, age 67, both hemispheres 10.2
2528 Male, age 74, both hemispheres 9.1
Entorhinal gyrus
nTPM: 10.1
1938 Female, age 85, left hemisphere 11.4
1787 Male, age 76, left hemisphere 10.4
2117 Female, age 91, right hemisphere 10.0
2764 Male, age 80, right hemisphere 10.0
2613 Female, age 94, left hemisphere 9.4
2686 Male, age 75, right hemisphere 9.2
Hippocampus, CA1
nTPM: 13.8
2749 Male, age 80, left hemisphere 17.9
2045 Male, age 76, both hemispheres 16.8
1873 Female, age 85, both hemispheres 14.6
2082 Female, age 91, right hemisphere 10.2
2527 Male, age 74, both hemispheres 9.6
Hippocampus, CA2
nTPM: 11.5
1963 Male, age 80, left hemisphere 15.5
1892 Male, age 76, both hemispheres 13.8
1940 Female, age 85, left hemisphere 10.7
2113 Female, age 91, right hemisphere 9.9
2437 Female, age 94, left hemisphere 9.8
2249 Male, age 74, both hemispheres 9.0
Hippocampus, CA3
nTPM: 11.7
1867 Male, age 76, both hemispheres 15.9
2137 Male, age 80, left hemisphere 14.1
1891 Female, age 85, both hemispheres 11.1
2861 Female, age 67, both hemispheres 10.4
2620 Female, age 94, left hemisphere 9.5
2436 Male, age 74, both hemispheres 8.9
Parahippocampal cortex
nTPM: 10.3
2018 Male, age 76, both hemispheres 16.0
1850 Male, age 80, both hemispheres 11.4
1933 Female, age 85, both hemispheres 10.4
2245 Female, age 91, both hemispheres 10.2
1990 Female, age 91, right hemisphere 10.0
2250 Female, age 67, right hemisphere 9.5
2532 Female, age 72, left hemisphere 9.4
2693 Female, age 94, both hemispheres 9.3
2692 Male, age 74, both hemispheres 8.3
2622 Female, age 67, right hemisphere 8.0
Perirhinal gyrus
nTPM: 10.4
1841 Female, age 85, right hemisphere 11.2
1794 Male, age 80, right hemisphere 10.3
1847 Female, age 91, left hemisphere 10.3
2848 Male, age 76, right hemisphere 10.2
2521 Female, age 94, right hemisphere 10.0
Subiculum
nTPM: 10.3
2042 Male, age 76, both hemispheres 14.0
1901 Male, age 80, both hemispheres 11.0
1977 Female, age 85, both hemispheres 10.0
2729 Female, age 91, right hemisphere 9.9
2438 Female, age 94, left hemisphere 9.1
2619 Male, age 74, both hemispheres 8.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 38.2
Min nTPM: 5.3
Std nTPM: 5.5
Median nTPM: 15.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 34.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 33.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 30.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 28.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 27.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 27.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 26.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 25.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 25.8
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 25.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.7
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.1
Samples: 4

Max nTPM: 33.3
Min nTPM: 23.2
Sample A Female 33.3
Sample B Female 32.5
Sample C Male 23.2
Sample D Male 31.5
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 17.8
Min nTPM: 15.9
Sample A Female 16.7
Sample B Female 17.6
Sample C Male 17.8
Sample D Male 15.9
Subiculum
nTPM: 19.7
Samples: 4

Max nTPM: 21.5
Min nTPM: 18.5
Sample A Female 21.5
Sample B Female 18.5
Sample C Male 18.8
Sample D Male 20.0
Ventral hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 30.5
Min nTPM: 22.7
Sample A Female 25.8
Sample B Female 24.4
Sample C Male 22.7
Sample D Male 30.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.0
Samples: 4

Max nTPM: 22.2
Min nTPM: 19.7
Sample A Male 21.2
Sample B Male 19.7
Sample C Female 20.8
Sample D Female 22.2
Hippocampal formation
nTPM: 25.2
Samples: 4

Max nTPM: 27.5
Min nTPM: 23.4
Sample A Male 24.7
Sample B Male 25.3
Sample C Female 27.5
Sample D Female 23.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
583865 Antisense, RP_040831_01_C05, Mouse strain C57BL/6J (56 days, male) 3.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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