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MYO5A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:19.0 nTPM
HPA:19.0 nTPM
GTEx:17.9 nTPM
FANTOM5:63.8 Scaled Tags Per Million
Pig:155.9 nTPM
Mouse:139.9 nTPM
Allen mouse:13.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001356
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.0
Sample id Sample description nTPM
Hippocampus
nTPM: 0.3
1898 Male, age 80, left hemisphere 1.8
1855 Male, age 76, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
Dentate gyrus
nTPM: 0.7
1927 Female, age 91, both hemispheres 4.4
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 9.8
2613 Female, age 94, left hemisphere 25.9
1938 Female, age 85, left hemisphere 14.3
2764 Male, age 80, right hemisphere 14.0
1787 Male, age 76, left hemisphere 4.5
2686 Male, age 75, right hemisphere 0.5
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 4.7
2749 Male, age 80, left hemisphere 23.7
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
Hippocampus, CA2
nTPM: 2.2
1892 Male, age 76, both hemispheres 10.6
2437 Female, age 94, left hemisphere 1.9
1963 Male, age 80, left hemisphere 1.0
1940 Female, age 85, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 2.8
2137 Male, age 80, left hemisphere 17.3
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
2620 Female, age 94, left hemisphere 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 7.1
1850 Male, age 80, both hemispheres 23.2
1990 Female, age 91, right hemisphere 13.9
2532 Female, age 72, left hemisphere 11.8
2693 Female, age 94, both hemispheres 11.1
2245 Female, age 91, both hemispheres 6.2
1933 Female, age 85, both hemispheres 3.1
2622 Female, age 67, right hemisphere 1.0
2250 Female, age 67, right hemisphere 0.3
2018 Male, age 76, both hemispheres 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 19.0
1847 Female, age 91, left hemisphere 29.8
1794 Male, age 80, right hemisphere 24.6
2521 Female, age 94, right hemisphere 17.8
1841 Female, age 85, right hemisphere 16.0
2848 Male, age 76, right hemisphere 6.8
Subiculum
nTPM: 1.2
1977 Female, age 85, both hemispheres 3.3
1901 Male, age 80, both hemispheres 3.1
2438 Female, age 94, left hemisphere 1.2
2042 Male, age 76, both hemispheres 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.9
Samples: 197

Max nTPM: 55.0
Min nTPM: 7.3
Std nTPM: 8.3
Median nTPM: 15.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 55.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 50.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 47.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 46.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 42.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 40.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 40.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 37.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 36.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 36.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 36.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.8
FF:10169-103B7 60 years, female 68.0
FF:10153-102I9 76 years, female 59.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 155.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 115.4
Samples: 4

Max nTPM: 132.5
Min nTPM: 89.0
Sample A Female 132.5
Sample B Female 114.5
Sample C Male 125.4
Sample D Male 89.0
Entorhinal cortex
nTPM: 155.9
Samples: 4

Max nTPM: 166.7
Min nTPM: 146.0
Sample A Female 149.6
Sample B Female 166.7
Sample C Male 161.3
Sample D Male 146.0
Subiculum
nTPM: 129.3
Samples: 4

Max nTPM: 160.0
Min nTPM: 113.9
Sample A Female 160.0
Sample B Female 113.9
Sample C Male 118.5
Sample D Male 124.6
Ventral hippocampus
nTPM: 102.0
Samples: 4

Max nTPM: 109.8
Min nTPM: 91.7
Sample A Female 109.8
Sample B Female 91.7
Sample C Male 99.5
Sample D Male 106.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 139.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 139.9
Samples: 4

Max nTPM: 161.0
Min nTPM: 117.9
Sample A Male 140.0
Sample B Male 140.6
Sample C Female 117.9
Sample D Female 161.0
Hippocampal formation
nTPM: 89.6
Samples: 4

Max nTPM: 95.8
Min nTPM: 86.7
Sample A Male 88.8
Sample B Male 95.8
Sample C Female 87.0
Sample D Female 86.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.1
70918838 Antisense, RP_050712_04_F03, Mouse strain C57BL/6J (56 days, male) 14.0
69782013 Antisense, RP_050505_02_B04, Mouse strain C57BL/6J (56 days, male) 12.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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