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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:21.4 nTPM
HPA:21.4 nTPM
GTEx:16.7 nTPM
FANTOM5:4.9 Scaled Tags Per Million
Pig:5.1 nTPM
Mouse:6.6 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB019302
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.4
Sample id Sample description nTPM
Hippocampus
nTPM: 20.7
2529 Female, age 94, left hemisphere 23.3
1911 Female, age 85, right hemisphere 20.8
1855 Male, age 76, left hemisphere 20.4
2148 Female, age 91, left hemisphere 20.1
2621 Female, age 67, right hemisphere 20.1
1898 Male, age 80, left hemisphere 19.9
Dentate gyrus
nTPM: 21.4
2528 Male, age 74, both hemispheres 27.7
2530 Female, age 94, left hemisphere 23.6
2010 Male, age 76, both hemispheres 22.8
2531 Female, age 67, both hemispheres 20.2
1927 Female, age 91, both hemispheres 17.2
2246 Female, age 85, both hemispheres 16.6
Entorhinal gyrus
nTPM: 15.8
2117 Female, age 91, right hemisphere 19.7
1787 Male, age 76, left hemisphere 16.9
2764 Male, age 80, right hemisphere 16.0
2686 Male, age 75, right hemisphere 14.9
1938 Female, age 85, left hemisphere 13.9
2613 Female, age 94, left hemisphere 13.2
Hippocampus, CA1
nTPM: 19.4
2045 Male, age 76, both hemispheres 21.3
2082 Female, age 91, right hemisphere 19.9
2527 Male, age 74, both hemispheres 19.8
1873 Female, age 85, both hemispheres 19.3
2749 Male, age 80, left hemisphere 16.8
Hippocampus, CA2
nTPM: 19.1
2249 Male, age 74, both hemispheres 24.2
1963 Male, age 80, left hemisphere 19.7
2113 Female, age 91, right hemisphere 18.8
1940 Female, age 85, left hemisphere 17.9
2437 Female, age 94, left hemisphere 17.5
1892 Male, age 76, both hemispheres 16.4
Hippocampus, CA3
nTPM: 19.8
2620 Female, age 94, left hemisphere 23.7
1867 Male, age 76, both hemispheres 20.5
2137 Male, age 80, left hemisphere 19.1
2436 Male, age 74, both hemispheres 19.0
2861 Female, age 67, both hemispheres 18.5
1891 Female, age 85, both hemispheres 17.8
Parahippocampal cortex
nTPM: 15.7
2018 Male, age 76, both hemispheres 19.7
2245 Female, age 91, both hemispheres 18.3
2692 Male, age 74, both hemispheres 16.4
2532 Female, age 72, left hemisphere 15.7
1933 Female, age 85, both hemispheres 15.6
2250 Female, age 67, right hemisphere 15.5
1990 Female, age 91, right hemisphere 15.0
1850 Male, age 80, both hemispheres 14.9
2622 Female, age 67, right hemisphere 13.2
2693 Female, age 94, both hemispheres 13.0
Perirhinal gyrus
nTPM: 15.0
2848 Male, age 76, right hemisphere 17.2
1847 Female, age 91, left hemisphere 15.3
1794 Male, age 80, right hemisphere 14.5
1841 Female, age 85, right hemisphere 14.2
2521 Female, age 94, right hemisphere 14.0
Subiculum
nTPM: 19.3
2042 Male, age 76, both hemispheres 23.9
2729 Female, age 91, right hemisphere 21.4
1901 Male, age 80, both hemispheres 20.1
2619 Male, age 74, both hemispheres 17.7
2438 Female, age 94, left hemisphere 16.6
1977 Female, age 85, both hemispheres 16.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.7
Samples: 197

Max nTPM: 57.6
Min nTPM: 2.8
Std nTPM: 8.7
Median nTPM: 15.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 57.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 56.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 45.0
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 41.4
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 37.8
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 36.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 36.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 35.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 35.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 34.7
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 33.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.9
FF:10169-103B7 60 years, female 6.2
FF:10153-102I9 76 years, female 3.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.1
Samples: 4

Max nTPM: 7.6
Min nTPM: 2.8
Sample A Female 5.8
Sample B Female 4.2
Sample C Male 7.6
Sample D Male 2.8
Entorhinal cortex
nTPM: 2.5
Samples: 4

Max nTPM: 3.7
Min nTPM: 1.4
Sample A Female 1.4
Sample B Female 3.7
Sample C Male 2.2
Sample D Male 2.5
Subiculum
nTPM: 3.1
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.1
Sample A Female 2.9
Sample B Female 2.1
Sample C Male 4.2
Sample D Male 3.3
Ventral hippocampus
nTPM: 3.2
Samples: 4

Max nTPM: 4.1
Min nTPM: 1.6
Sample A Female 1.6
Sample B Female 3.0
Sample C Male 4.1
Sample D Male 4.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.3
Samples: 4

Max nTPM: 6.9
Min nTPM: 4.4
Sample A Male 4.9
Sample B Male 4.4
Sample C Female 4.9
Sample D Female 6.9
Hippocampal formation
nTPM: 6.6
Samples: 4

Max nTPM: 7.3
Min nTPM: 5.0
Sample A Male 5.0
Sample B Male 6.9
Sample C Female 7.1
Sample D Female 7.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
71836874 Antisense, RP_051017_02_E04, Mouse strain C57BL/6J (56 days, male) 0.3
68744624 Antisense, RP_050208_01_C07, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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