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MBP
AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		111.913
RNA expressioni
Consensus:15448.6 nTPM
HPA:15448.6 nTPM
GTEx:16288.2 nTPM
FANTOM5:4544.5 Scaled Tags Per Million
Pig:1843.4 nTPM
Mouse:1501.8 nTPM
Allen mouse:11.6 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA049222
Amygdala mean intensity 111.913
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 111.913
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 98.012
Cortical amygdala 89.513
Central amygdala 92.161
Medial amygdaloid nucleus 103.943

AMYGDALA - HPA Brain RNA-seq
Max nTPM 15448.6
Sample id Sample description nTPM
Amygdala
nTPM: 13415.2
2695 Female, age 67, right hemisphere 17177.6
2814 Male, age 76, right hemisphere 15140.0
2517 Female, age 94, left hemisphere 11824.3
2514 Male, age 75, right hemisphere 11727.7
1987 Female, age 91, left hemisphere 11206.5
Basal amygdala
nTPM: 12722.3
2827 Female, age 67, right hemisphere 18412.5
2685 Female, age 94, left hemisphere 12422.9
2110 Male, age 80, left hemisphere 12060.0
2609 Male, age 75, right hemisphere 11827.9
1955 Male, age 76, both hemispheres 11562.8
2243 Female, age 91, right hemisphere 10047.6
Central amygdala
nTPM: 14264.8
2826 Female, age 94, left hemisphere 21952.8
1905 Male, age 76, both hemispheres 13123.5
2515 Male, age 75, right hemisphere 12361.9
2239 Male, age 80, left hemisphere 12015.5
2701 Female, age 91, right hemisphere 11870.1
Corticomedial amygdala
nTPM: 10852.1
2535 Female, age 67, right hemisphere 13457.1
2428 Male, age 75, right hemisphere 11255.1
2829 Male, age 80, left hemisphere 10650.8
2240 Male, age 76, both hemispheres 10545.0
2429 Female, age 94, left hemisphere 9900.9
2242 Female, age 91, right hemisphere 9303.6
Lateral amygdala
nTPM: 15448.6
2830 Female, age 67, right hemisphere 23337.1
2534 Female, age 94, left hemisphere 15258.7
2256 Male, age 80, left hemisphere 14540.0
2516 Male, age 75, right hemisphere 14210.5
1883 Male, age 76, both hemispheres 13678.7
2255 Female, age 91, right hemisphere 11666.9
Stria terminalis, bed nucleus
nTPM: 10350.8
2201 Male, age 74, unknown 10943.2
1974 Female, age 91, both hemispheres 10689.2
2486 Female, age 94, both hemispheres 9420.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 16288.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 16288.2
Samples: 152

Max nTPM: 66566.3
Min nTPM: 91.5
Std nTPM: 12868.2
Median nTPM: 11544.3
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 66566.3
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 61710.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 56700.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 52792.4
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 45614.3
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 43047.8
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 42851.2
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 40845.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 40821.0
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 40038.3
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 39742.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 4544.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 4544.5
FF:10151-102I7 76 years, female 4544.5

AMYGDALA - Pig RNA-seqi
Average nTPM 1843.4
Pig sample Sample description nTPM
Amygdala
nTPM: 1843.4
Samples: 4

Max nTPM: 3335.1
Min nTPM: 852.6
Sample A Female 1098.5
Sample B Female 3335.1
Sample C Male 2087.3
Sample D Male 852.6

AMYGDALA - Mouse RNA-seqi
Average nTPM 1501.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 1501.8
Samples: 4

Max nTPM: 2629.3
Min nTPM: 1110.9
Sample A Male 1110.9
Sample B Male 1136.0
Sample C Female 2629.3
Sample D Female 1130.9

AMYGDALA - Allen Mouse ISHi
Max Expression energy 11.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 11.6
112202838 Antisense, RP_110421_01_F01, Mouse strain C57BL/6J (56 days, male) 16.1
79632288 Antisense, RP_071204_01_C03, Mouse strain C57BL/6J (56 days, male) 7.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.