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ZNF84
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:14.7 nTPM
HPA:14.7 nTPM
GTEx:18.2 nTPM
FANTOM5:28.7 Scaled Tags Per Million
Pig:12.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028860
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.7
Sample id Sample description nTPM
Hippocampus
nTPM: 12.5
1911 Female, age 85, right hemisphere 13.7
2148 Female, age 91, left hemisphere 12.8
1898 Male, age 80, left hemisphere 12.4
2621 Female, age 67, right hemisphere 12.3
1855 Male, age 76, left hemisphere 12.0
2529 Female, age 94, left hemisphere 11.6
Dentate gyrus
nTPM: 13.1
2010 Male, age 76, both hemispheres 14.9
1927 Female, age 91, both hemispheres 13.6
2246 Female, age 85, both hemispheres 13.6
2528 Male, age 74, both hemispheres 12.7
2531 Female, age 67, both hemispheres 12.1
2530 Female, age 94, left hemisphere 11.5
Entorhinal gyrus
nTPM: 13.8
2686 Male, age 75, right hemisphere 15.8
1938 Female, age 85, left hemisphere 14.2
1787 Male, age 76, left hemisphere 13.8
2613 Female, age 94, left hemisphere 13.8
2764 Male, age 80, right hemisphere 12.9
2117 Female, age 91, right hemisphere 12.1
Hippocampus, CA1
nTPM: 13.2
2045 Male, age 76, both hemispheres 15.3
1873 Female, age 85, both hemispheres 13.8
2082 Female, age 91, right hemisphere 13.1
2527 Male, age 74, both hemispheres 12.9
2749 Male, age 80, left hemisphere 11.1
Hippocampus, CA2
nTPM: 13.3
1892 Male, age 76, both hemispheres 14.1
2113 Female, age 91, right hemisphere 13.5
1963 Male, age 80, left hemisphere 13.3
2249 Male, age 74, both hemispheres 13.3
1940 Female, age 85, left hemisphere 13.1
2437 Female, age 94, left hemisphere 12.5
Hippocampus, CA3
nTPM: 13.4
1891 Female, age 85, both hemispheres 14.7
2620 Female, age 94, left hemisphere 14.3
2436 Male, age 74, both hemispheres 13.8
1867 Male, age 76, both hemispheres 13.6
2861 Female, age 67, both hemispheres 13.0
2137 Male, age 80, left hemisphere 11.2
Parahippocampal cortex
nTPM: 14.7
2693 Female, age 94, both hemispheres 17.5
2622 Female, age 67, right hemisphere 16.5
1850 Male, age 80, both hemispheres 15.3
2692 Male, age 74, both hemispheres 15.1
2018 Male, age 76, both hemispheres 15.0
1990 Female, age 91, right hemisphere 14.6
1933 Female, age 85, both hemispheres 14.4
2250 Female, age 67, right hemisphere 13.1
2532 Female, age 72, left hemisphere 12.9
2245 Female, age 91, both hemispheres 12.2
Perirhinal gyrus
nTPM: 14.0
1841 Female, age 85, right hemisphere 15.4
1794 Male, age 80, right hemisphere 14.8
2848 Male, age 76, right hemisphere 13.7
1847 Female, age 91, left hemisphere 12.9
2521 Female, age 94, right hemisphere 12.9
Subiculum
nTPM: 13.0
1977 Female, age 85, both hemispheres 14.9
1901 Male, age 80, both hemispheres 14.2
2729 Female, age 91, right hemisphere 13.4
2042 Male, age 76, both hemispheres 12.9
2619 Male, age 74, both hemispheres 12.0
2438 Female, age 94, left hemisphere 10.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.2
Samples: 197

Max nTPM: 40.9
Min nTPM: 8.7
Std nTPM: 4.0
Median nTPM: 18.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 40.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 29.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 27.3
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 26.9
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 26.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 26.7
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 26.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 26.2
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 25.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 25.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 25.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.7
FF:10153-102I9 76 years, female 29.2
FF:10169-103B7 60 years, female 28.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.7
Samples: 4

Max nTPM: 12.1
Min nTPM: 11.2
Sample A Female 11.2
Sample B Female 12.0
Sample C Male 12.1
Sample D Male 11.3
Entorhinal cortex
nTPM: 12.2
Samples: 4

Max nTPM: 12.7
Min nTPM: 11.3
Sample A Female 12.3
Sample B Female 12.7
Sample C Male 12.5
Sample D Male 11.3
Subiculum
nTPM: 12.3
Samples: 4

Max nTPM: 12.9
Min nTPM: 11.8
Sample A Female 12.9
Sample B Female 12.4
Sample C Male 12.0
Sample D Male 11.8
Ventral hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 12.1
Min nTPM: 9.4
Sample A Female 11.0
Sample B Female 11.7
Sample C Male 9.4
Sample D Male 12.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.