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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:20.0 nTPM
HPA:20.0 nTPM
GTEx:20.8 nTPM
FANTOM5:20.5 Scaled Tags Per Million
Pig:12.2 nTPM
Mouse:15.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.0
Sample id Sample description nTPM
Hippocampus
nTPM: 18.9
2621 Female, age 67, right hemisphere 19.7
2529 Female, age 94, left hemisphere 19.5
1855 Male, age 76, left hemisphere 19.4
2148 Female, age 91, left hemisphere 19.2
1911 Female, age 85, right hemisphere 18.3
1898 Male, age 80, left hemisphere 17.4
Dentate gyrus
nTPM: 18.9
1927 Female, age 91, both hemispheres 20.2
2530 Female, age 94, left hemisphere 20.2
2531 Female, age 67, both hemispheres 19.2
2010 Male, age 76, both hemispheres 18.3
2528 Male, age 74, both hemispheres 18.1
2246 Female, age 85, both hemispheres 17.4
Entorhinal gyrus
nTPM: 19.8
2686 Male, age 75, right hemisphere 21.0
2613 Female, age 94, left hemisphere 20.5
2117 Female, age 91, right hemisphere 20.2
2764 Male, age 80, right hemisphere 20.0
1938 Female, age 85, left hemisphere 18.7
1787 Male, age 76, left hemisphere 18.1
Hippocampus, CA1
nTPM: 19.1
2082 Female, age 91, right hemisphere 20.6
2527 Male, age 74, both hemispheres 19.2
2045 Male, age 76, both hemispheres 19.0
1873 Female, age 85, both hemispheres 18.3
2749 Male, age 80, left hemisphere 18.2
Hippocampus, CA2
nTPM: 20.0
2437 Female, age 94, left hemisphere 22.3
2113 Female, age 91, right hemisphere 21.2
1963 Male, age 80, left hemisphere 20.5
1892 Male, age 76, both hemispheres 19.3
1940 Female, age 85, left hemisphere 18.4
2249 Male, age 74, both hemispheres 18.4
Hippocampus, CA3
nTPM: 18.8
2861 Female, age 67, both hemispheres 19.8
2436 Male, age 74, both hemispheres 19.3
1891 Female, age 85, both hemispheres 19.2
1867 Male, age 76, both hemispheres 18.8
2137 Male, age 80, left hemisphere 18.8
2620 Female, age 94, left hemisphere 17.2
Parahippocampal cortex
nTPM: 19.4
2692 Male, age 74, both hemispheres 20.8
2693 Female, age 94, both hemispheres 20.5
2622 Female, age 67, right hemisphere 20.1
1990 Female, age 91, right hemisphere 19.7
2018 Male, age 76, both hemispheres 19.7
2532 Female, age 72, left hemisphere 19.4
1933 Female, age 85, both hemispheres 18.9
2245 Female, age 91, both hemispheres 18.4
2250 Female, age 67, right hemisphere 18.3
1850 Male, age 80, both hemispheres 17.9
Perirhinal gyrus
nTPM: 18.3
2848 Male, age 76, right hemisphere 19.2
1841 Female, age 85, right hemisphere 18.9
1794 Male, age 80, right hemisphere 18.4
2521 Female, age 94, right hemisphere 17.7
1847 Female, age 91, left hemisphere 17.4
Subiculum
nTPM: 19.2
2619 Male, age 74, both hemispheres 20.0
2729 Female, age 91, right hemisphere 19.6
1901 Male, age 80, both hemispheres 19.4
2042 Male, age 76, both hemispheres 19.2
1977 Female, age 85, both hemispheres 18.7
2438 Female, age 94, left hemisphere 18.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.8
Samples: 197

Max nTPM: 39.5
Min nTPM: 8.9
Std nTPM: 4.0
Median nTPM: 20.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 39.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 33.5
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 33.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 31.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 31.2
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 29.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 28.5
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 28.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 27.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 27.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 27.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.5
FF:10153-102I9 76 years, female 24.2
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 14.3
Min nTPM: 9.8
Sample A Female 14.3
Sample B Female 12.6
Sample C Male 12.4
Sample D Male 9.8
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.7
Sample A Female 12.3
Sample B Female 10.5
Sample C Male 10.1
Sample D Male 9.7
Subiculum
nTPM: 11.2
Samples: 4

Max nTPM: 12.2
Min nTPM: 10.5
Sample A Female 12.2
Sample B Female 11.0
Sample C Male 11.0
Sample D Male 10.5
Ventral hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 13.9
Min nTPM: 9.9
Sample A Female 12.3
Sample B Female 9.9
Sample C Male 13.9
Sample D Male 12.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.9
Samples: 4

Max nTPM: 16.7
Min nTPM: 15.5
Sample A Male 15.5
Sample B Male 15.5
Sample C Female 15.9
Sample D Female 16.7
Hippocampal formation
nTPM: 15.0
Samples: 4

Max nTPM: 16.9
Min nTPM: 13.6
Sample A Male 13.6
Sample B Male 14.2
Sample C Female 16.9
Sample D Female 15.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
386002 Antisense, RP_040625_01_H01, Mouse strain C57BL/6J (56 days, male) 0.3

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