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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:635.9 nTPM
HPA:635.9 nTPM
GTEx:712.3 nTPM
FANTOM5:2627.7 Scaled Tags Per Million
Pig:1195.2 nTPM
Mouse:1504.4 nTPM
Allen mouse:15.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044999Antibody CAB018558
Glial cells Not detectedMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 635.9
Sample id Sample description nTPM
Hippocampus
nTPM: 497.5
1898 Male, age 80, left hemisphere 586.5
1911 Female, age 85, right hemisphere 537.2
2621 Female, age 67, right hemisphere 527.4
2148 Female, age 91, left hemisphere 495.8
1855 Male, age 76, left hemisphere 459.3
2529 Female, age 94, left hemisphere 378.8
Dentate gyrus
nTPM: 534.0
1927 Female, age 91, both hemispheres 886.1
2246 Female, age 85, both hemispheres 497.1
2010 Male, age 76, both hemispheres 491.0
2531 Female, age 67, both hemispheres 459.3
2530 Female, age 94, left hemisphere 437.5
2528 Male, age 74, both hemispheres 432.7
Entorhinal gyrus
nTPM: 420.9
1938 Female, age 85, left hemisphere 546.9
2613 Female, age 94, left hemisphere 492.9
1787 Male, age 76, left hemisphere 454.8
2764 Male, age 80, right hemisphere 392.2
2686 Male, age 75, right hemisphere 347.9
2117 Female, age 91, right hemisphere 290.7
Hippocampus, CA1
nTPM: 635.9
2749 Male, age 80, left hemisphere 1103.6
2045 Male, age 76, both hemispheres 610.7
1873 Female, age 85, both hemispheres 568.3
2527 Male, age 74, both hemispheres 538.4
2082 Female, age 91, right hemisphere 358.4
Hippocampus, CA2
nTPM: 479.7
1963 Male, age 80, left hemisphere 705.7
1892 Male, age 76, both hemispheres 618.5
2249 Male, age 74, both hemispheres 442.7
2113 Female, age 91, right hemisphere 385.2
1940 Female, age 85, left hemisphere 368.9
2437 Female, age 94, left hemisphere 357.1
Hippocampus, CA3
nTPM: 576.8
2137 Male, age 80, left hemisphere 1066.2
2620 Female, age 94, left hemisphere 562.8
1867 Male, age 76, both hemispheres 501.6
2436 Male, age 74, both hemispheres 462.1
2861 Female, age 67, both hemispheres 443.5
1891 Female, age 85, both hemispheres 424.8
Parahippocampal cortex
nTPM: 469.2
2245 Female, age 91, both hemispheres 642.3
1850 Male, age 80, both hemispheres 620.7
1933 Female, age 85, both hemispheres 517.0
2250 Female, age 67, right hemisphere 476.7
1990 Female, age 91, right hemisphere 468.4
2693 Female, age 94, both hemispheres 461.3
2532 Female, age 72, left hemisphere 430.8
2018 Male, age 76, both hemispheres 383.0
2692 Male, age 74, both hemispheres 350.7
2622 Female, age 67, right hemisphere 341.3
Perirhinal gyrus
nTPM: 596.4
1847 Female, age 91, left hemisphere 755.6
1841 Female, age 85, right hemisphere 613.9
1794 Male, age 80, right hemisphere 595.3
2521 Female, age 94, right hemisphere 533.0
2848 Male, age 76, right hemisphere 484.1
Subiculum
nTPM: 394.5
1901 Male, age 80, both hemispheres 567.9
2042 Male, age 76, both hemispheres 405.8
1977 Female, age 85, both hemispheres 379.9
2438 Female, age 94, left hemisphere 357.3
2729 Female, age 91, right hemisphere 340.3
2619 Male, age 74, both hemispheres 315.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 712.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 712.3
Samples: 197

Max nTPM: 1516.2
Min nTPM: 204.6
Std nTPM: 313.3
Median nTPM: 666.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1516.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 1450.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1430.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 1412.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 1412.3
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 1410.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1381.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1379.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 1374.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 1329.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 1326.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 2627.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 2627.7
FF:10169-103B7 60 years, female 3471.8
FF:10153-102I9 76 years, female 1783.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1195.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 956.7
Samples: 4

Max nTPM: 1196.6
Min nTPM: 727.1
Sample A Female 1196.6
Sample B Female 1106.2
Sample C Male 727.1
Sample D Male 796.8
Entorhinal cortex
nTPM: 1195.2
Samples: 4

Max nTPM: 1286.8
Min nTPM: 993.4
Sample A Female 1281.0
Sample B Female 1286.8
Sample C Male 1219.7
Sample D Male 993.4
Subiculum
nTPM: 846.4
Samples: 4

Max nTPM: 1002.9
Min nTPM: 754.0
Sample A Female 1002.9
Sample B Female 832.4
Sample C Male 754.0
Sample D Male 796.4
Ventral hippocampus
nTPM: 835.0
Samples: 4

Max nTPM: 1051.1
Min nTPM: 713.2
Sample A Female 797.7
Sample B Female 713.2
Sample C Male 778.0
Sample D Male 1051.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1504.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1504.4
Samples: 4

Max nTPM: 1587.5
Min nTPM: 1463.1
Sample A Male 1501.1
Sample B Male 1587.5
Sample C Female 1463.1
Sample D Female 1465.7
Hippocampal formation
nTPM: 1373.7
Samples: 4

Max nTPM: 1574.2
Min nTPM: 1226.8
Sample A Male 1574.2
Sample B Male 1335.1
Sample C Female 1358.7
Sample D Female 1226.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.9
179 Antisense, RP_Baylor_102652, Mouse strain C57BL/6J (56 days, male) 15.9
180 Antisense, RP_Baylor_102652, Mouse strain C57BL/6J (56 days, male) 14.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.