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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.2 nTPM
HPA:11.2 nTPM
GTEx:10.4 nTPM
FANTOM5:43.3 Scaled Tags Per Million
Pig:41.4 nTPM
Mouse:5.4 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.2
Sample id Sample description nTPM
Hippocampus
nTPM: 5.6
2148 Female, age 91, left hemisphere 14.7
1855 Male, age 76, left hemisphere 7.0
1898 Male, age 80, left hemisphere 6.6
2621 Female, age 67, right hemisphere 5.5
1911 Female, age 85, right hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 9.2
1927 Female, age 91, both hemispheres 19.6
2531 Female, age 67, both hemispheres 17.4
2528 Male, age 74, both hemispheres 7.4
2246 Female, age 85, both hemispheres 5.1
2010 Male, age 76, both hemispheres 3.7
2530 Female, age 94, left hemisphere 1.8
Entorhinal gyrus
nTPM: 1.2
1787 Male, age 76, left hemisphere 4.2
2764 Male, age 80, right hemisphere 3.5
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2613 Female, age 94, left hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 4.9
1873 Female, age 85, both hemispheres 12.4
2045 Male, age 76, both hemispheres 12.3
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 2.9
1892 Male, age 76, both hemispheres 6.8
1963 Male, age 80, left hemisphere 6.2
1940 Female, age 85, left hemisphere 4.8
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 4.5
2620 Female, age 94, left hemisphere 15.2
2861 Female, age 67, both hemispheres 12.0
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 4.6
2693 Female, age 94, both hemispheres 13.7
1933 Female, age 85, both hemispheres 8.4
2250 Female, age 67, right hemisphere 7.4
2245 Female, age 91, both hemispheres 5.1
1850 Male, age 80, both hemispheres 3.8
2532 Female, age 72, left hemisphere 3.6
2622 Female, age 67, right hemisphere 3.0
1990 Female, age 91, right hemisphere 1.5
2018 Male, age 76, both hemispheres 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 11.2
1841 Female, age 85, right hemisphere 14.4
2521 Female, age 94, right hemisphere 11.6
2848 Male, age 76, right hemisphere 11.1
1794 Male, age 80, right hemisphere 10.3
1847 Female, age 91, left hemisphere 8.6
Subiculum
nTPM: 1.7
1977 Female, age 85, both hemispheres 5.7
2729 Female, age 91, right hemisphere 4.6
1901 Male, age 80, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.4
Samples: 197

Max nTPM: 43.4
Min nTPM: 0.2
Std nTPM: 9.2
Median nTPM: 6.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 43.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 42.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 40.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 33.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 30.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 29.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 29.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 29.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 28.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 28.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 28.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.3
FF:10169-103B7 60 years, female 57.5
FF:10153-102I9 76 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.8
Samples: 4

Max nTPM: 39.2
Min nTPM: 8.7
Sample A Female 33.1
Sample B Female 34.1
Sample C Male 8.7
Sample D Male 39.2
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 24.2
Min nTPM: 16.9
Sample A Female 16.9
Sample B Female 24.2
Sample C Male 20.6
Sample D Male 17.7
Subiculum
nTPM: 41.4
Samples: 4

Max nTPM: 51.4
Min nTPM: 31.0
Sample A Female 51.4
Sample B Female 41.1
Sample C Male 31.0
Sample D Male 42.2
Ventral hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 25.1
Min nTPM: 14.9
Sample A Female 25.1
Sample B Female 17.0
Sample C Male 19.1
Sample D Male 14.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.4
Samples: 4

Max nTPM: 7.0
Min nTPM: 3.9
Sample A Male 4.2
Sample B Male 6.4
Sample C Female 3.9
Sample D Female 7.0
Hippocampal formation
nTPM: 4.5
Samples: 4

Max nTPM: 4.6
Min nTPM: 4.3
Sample A Male 4.6
Sample B Male 4.5
Sample C Female 4.3
Sample D Female 4.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
71281764 Antisense, RP_050818_02_F12, Mouse strain C57BL/6J (56 days, male) 1.3
73636033 Antisense, RP_050818_02_F12, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

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