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SCAMP5
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:128.7 nTPM
HPA:128.7 nTPM
GTEx:123.0 nTPM
FANTOM5:272.0 Scaled Tags Per Million
Pig:106.7 nTPM
Mouse:314.1 nTPM
Allen mouse:20.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046645
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 128.7
Sample id Sample description nTPM
Hippocampus
nTPM: 91.6
1898 Male, age 80, left hemisphere 120.3
2621 Female, age 67, right hemisphere 107.5
2148 Female, age 91, left hemisphere 104.9
1855 Male, age 76, left hemisphere 90.0
1911 Female, age 85, right hemisphere 69.4
2529 Female, age 94, left hemisphere 57.3
Dentate gyrus
nTPM: 104.5
1927 Female, age 91, both hemispheres 138.4
2530 Female, age 94, left hemisphere 118.9
2531 Female, age 67, both hemispheres 110.4
2010 Male, age 76, both hemispheres 93.5
2528 Male, age 74, both hemispheres 84.3
2246 Female, age 85, both hemispheres 81.7
Entorhinal gyrus
nTPM: 108.8
2613 Female, age 94, left hemisphere 162.5
2764 Male, age 80, right hemisphere 117.5
2686 Male, age 75, right hemisphere 106.4
1938 Female, age 85, left hemisphere 105.5
1787 Male, age 76, left hemisphere 101.9
2117 Female, age 91, right hemisphere 58.9
Hippocampus, CA1
nTPM: 109.6
2749 Male, age 80, left hemisphere 195.6
1873 Female, age 85, both hemispheres 105.8
2045 Male, age 76, both hemispheres 90.8
2527 Male, age 74, both hemispheres 86.1
2082 Female, age 91, right hemisphere 69.8
Hippocampus, CA2
nTPM: 97.3
1892 Male, age 76, both hemispheres 135.4
1963 Male, age 80, left hemisphere 130.8
2437 Female, age 94, left hemisphere 109.3
1940 Female, age 85, left hemisphere 71.3
2113 Female, age 91, right hemisphere 70.3
2249 Male, age 74, both hemispheres 66.3
Hippocampus, CA3
nTPM: 110.6
2137 Male, age 80, left hemisphere 146.5
2620 Female, age 94, left hemisphere 145.9
2861 Female, age 67, both hemispheres 130.1
1867 Male, age 76, both hemispheres 102.7
1891 Female, age 85, both hemispheres 70.0
2436 Male, age 74, both hemispheres 68.1
Parahippocampal cortex
nTPM: 104.2
2693 Female, age 94, both hemispheres 130.0
1850 Male, age 80, both hemispheres 118.3
2622 Female, age 67, right hemisphere 113.9
1990 Female, age 91, right hemisphere 108.8
2245 Female, age 91, both hemispheres 108.6
1933 Female, age 85, both hemispheres 102.5
2250 Female, age 67, right hemisphere 98.3
2532 Female, age 72, left hemisphere 95.0
2692 Male, age 74, both hemispheres 91.6
2018 Male, age 76, both hemispheres 75.3
Perirhinal gyrus
nTPM: 128.7
1847 Female, age 91, left hemisphere 150.5
2521 Female, age 94, right hemisphere 138.2
1794 Male, age 80, right hemisphere 132.8
1841 Female, age 85, right hemisphere 113.8
2848 Male, age 76, right hemisphere 108.2
Subiculum
nTPM: 79.4
1977 Female, age 85, both hemispheres 98.9
1901 Male, age 80, both hemispheres 91.0
2619 Male, age 74, both hemispheres 89.7
2438 Female, age 94, left hemisphere 74.5
2729 Female, age 91, right hemisphere 64.1
2042 Male, age 76, both hemispheres 58.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 123.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 123.0
Samples: 197

Max nTPM: 296.6
Min nTPM: 17.3
Std nTPM: 61.7
Median nTPM: 115.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 296.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 286.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 256.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 254.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 252.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 249.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 248.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 246.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 235.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 227.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 224.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 272.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 272.0
FF:10169-103B7 60 years, female 393.4
FF:10153-102I9 76 years, female 150.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 106.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 104.0
Samples: 4

Max nTPM: 121.7
Min nTPM: 73.7
Sample A Female 121.7
Sample B Female 116.3
Sample C Male 104.2
Sample D Male 73.7
Entorhinal cortex
nTPM: 106.7
Samples: 4

Max nTPM: 117.6
Min nTPM: 96.5
Sample A Female 115.3
Sample B Female 97.3
Sample C Male 117.6
Sample D Male 96.5
Subiculum
nTPM: 97.3
Samples: 4

Max nTPM: 125.8
Min nTPM: 79.4
Sample A Female 125.8
Sample B Female 87.7
Sample C Male 96.4
Sample D Male 79.4
Ventral hippocampus
nTPM: 105.2
Samples: 4

Max nTPM: 132.3
Min nTPM: 73.4
Sample A Female 117.8
Sample B Female 73.4
Sample C Male 132.3
Sample D Male 97.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 314.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 314.1
Samples: 4

Max nTPM: 371.2
Min nTPM: 289.5
Sample A Male 289.5
Sample B Male 301.1
Sample C Female 294.4
Sample D Female 371.2
Hippocampal formation
nTPM: 311.1
Samples: 4

Max nTPM: 357.0
Min nTPM: 288.3
Sample A Male 288.3
Sample B Male 304.3
Sample C Female 357.0
Sample D Female 294.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.6
583561 Antisense, RP_040831_02_H11, Mouse strain C57BL/6J (56 days, male) 21.5
81599672 Antisense, RP_071219_04_G12, Mouse strain C57BL/6J (56 days, male) 19.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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