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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:17.7 nTPM
HPA:17.7 nTPM
GTEx:19.2 nTPM
FANTOM5:62.7 Scaled Tags Per Million
Pig:18.3 nTPM
Mouse:1.7 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001625
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.7
Sample id Sample description nTPM
Hippocampus
nTPM: 17.4
2529 Female, age 94, left hemisphere 19.0
2148 Female, age 91, left hemisphere 17.7
1898 Male, age 80, left hemisphere 17.2
1911 Female, age 85, right hemisphere 17.0
1855 Male, age 76, left hemisphere 16.9
2621 Female, age 67, right hemisphere 16.3
Dentate gyrus
nTPM: 16.9
2528 Male, age 74, both hemispheres 21.5
2010 Male, age 76, both hemispheres 17.0
2530 Female, age 94, left hemisphere 16.6
2246 Female, age 85, both hemispheres 16.2
1927 Female, age 91, both hemispheres 15.6
2531 Female, age 67, both hemispheres 14.6
Entorhinal gyrus
nTPM: 15.0
2686 Male, age 75, right hemisphere 16.5
2117 Female, age 91, right hemisphere 16.1
1787 Male, age 76, left hemisphere 15.8
1938 Female, age 85, left hemisphere 14.8
2764 Male, age 80, right hemisphere 13.8
2613 Female, age 94, left hemisphere 13.3
Hippocampus, CA1
nTPM: 16.9
2527 Male, age 74, both hemispheres 18.4
1873 Female, age 85, both hemispheres 17.6
2045 Male, age 76, both hemispheres 17.2
2082 Female, age 91, right hemisphere 15.9
2749 Male, age 80, left hemisphere 15.3
Hippocampus, CA2
nTPM: 17.1
2249 Male, age 74, both hemispheres 19.7
1963 Male, age 80, left hemisphere 17.1
2113 Female, age 91, right hemisphere 16.7
1892 Male, age 76, both hemispheres 16.5
2437 Female, age 94, left hemisphere 16.4
1940 Female, age 85, left hemisphere 16.2
Hippocampus, CA3
nTPM: 17.7
2620 Female, age 94, left hemisphere 19.0
1867 Male, age 76, both hemispheres 18.7
2436 Male, age 74, both hemispheres 18.3
1891 Female, age 85, both hemispheres 17.2
2861 Female, age 67, both hemispheres 17.2
2137 Male, age 80, left hemisphere 15.6
Parahippocampal cortex
nTPM: 15.2
2018 Male, age 76, both hemispheres 19.8
2250 Female, age 67, right hemisphere 16.0
2622 Female, age 67, right hemisphere 15.3
2245 Female, age 91, both hemispheres 15.1
1933 Female, age 85, both hemispheres 14.6
2692 Male, age 74, both hemispheres 14.6
1990 Female, age 91, right hemisphere 14.5
1850 Male, age 80, both hemispheres 14.3
2532 Female, age 72, left hemisphere 13.8
2693 Female, age 94, both hemispheres 13.6
Perirhinal gyrus
nTPM: 14.5
1841 Female, age 85, right hemisphere 14.8
1794 Male, age 80, right hemisphere 14.6
1847 Female, age 91, left hemisphere 14.6
2848 Male, age 76, right hemisphere 14.4
2521 Female, age 94, right hemisphere 14.1
Subiculum
nTPM: 16.7
2042 Male, age 76, both hemispheres 18.0
2729 Female, age 91, right hemisphere 17.7
2438 Female, age 94, left hemisphere 17.5
2619 Male, age 74, both hemispheres 16.9
1977 Female, age 85, both hemispheres 15.1
1901 Male, age 80, both hemispheres 15.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.2
Samples: 197

Max nTPM: 116.2
Min nTPM: 6.0
Std nTPM: 14.6
Median nTPM: 13.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 116.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 77.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 72.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 70.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 70.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 64.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 57.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 56.8
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 55.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 53.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 52.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.7
FF:10169-103B7 60 years, female 73.2
FF:10153-102I9 76 years, female 52.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.3
Samples: 4

Max nTPM: 21.5
Min nTPM: 16.1
Sample A Female 21.5
Sample B Female 16.1
Sample C Male 17.0
Sample D Male 18.5
Entorhinal cortex
nTPM: 14.9
Samples: 4

Max nTPM: 17.8
Min nTPM: 11.5
Sample A Female 15.3
Sample B Female 17.8
Sample C Male 14.9
Sample D Male 11.5
Subiculum
nTPM: 16.4
Samples: 4

Max nTPM: 22.1
Min nTPM: 14.0
Sample A Female 22.1
Sample B Female 14.7
Sample C Male 14.0
Sample D Male 14.8
Ventral hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 18.2
Min nTPM: 13.5
Sample A Female 16.1
Sample B Female 13.5
Sample C Male 18.2
Sample D Male 15.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.2
Samples: 4

Max nTPM: 22.0
Min nTPM: 18.0
Sample A Male 22.0
Sample B Male 21.7
Sample C Female 18.0
Sample D Female 19.2
Hippocampal formation
nTPM: 21.0
Samples: 4

Max nTPM: 24.9
Min nTPM: 15.3
Sample A Male 22.4
Sample B Male 15.3
Sample C Female 21.3
Sample D Female 24.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68191558 Antisense, RP_041129_01_D08, Mouse strain C57BL/6J (56 days, male) 0.0
Hippocampal formation
Expression energy: 0.0
68191558 Antisense, RP_041129_01_D08, Mouse strain C57BL/6J (56 days, male) 0.0
Hippocampal formation
Expression energy: 0.0
68191558 Antisense, RP_041129_01_D08, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.