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FOXJ3
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:19.7 nTPM
HPA:19.7 nTPM
GTEx:17.4 nTPM
FANTOM5:74.4 Scaled Tags Per Million
Pig:37.3 nTPM
Mouse:36.3 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.7
Sample id Sample description nTPM
Hippocampus
nTPM: 18.4
2621 Female, age 67, right hemisphere 21.4
1911 Female, age 85, right hemisphere 18.9
1855 Male, age 76, left hemisphere 18.7
1898 Male, age 80, left hemisphere 17.4
2148 Female, age 91, left hemisphere 17.1
2529 Female, age 94, left hemisphere 16.8
Dentate gyrus
nTPM: 18.2
2246 Female, age 85, both hemispheres 22.4
2010 Male, age 76, both hemispheres 19.4
1927 Female, age 91, both hemispheres 18.9
2531 Female, age 67, both hemispheres 18.0
2528 Male, age 74, both hemispheres 15.8
2530 Female, age 94, left hemisphere 14.8
Entorhinal gyrus
nTPM: 14.7
1938 Female, age 85, left hemisphere 16.3
2764 Male, age 80, right hemisphere 16.1
2613 Female, age 94, left hemisphere 15.6
1787 Male, age 76, left hemisphere 15.0
2686 Male, age 75, right hemisphere 13.0
2117 Female, age 91, right hemisphere 12.6
Hippocampus, CA1
nTPM: 19.4
2045 Male, age 76, both hemispheres 23.5
2749 Male, age 80, left hemisphere 23.0
1873 Female, age 85, both hemispheres 21.0
2527 Male, age 74, both hemispheres 16.2
2082 Female, age 91, right hemisphere 13.2
Hippocampus, CA2
nTPM: 15.5
1892 Male, age 76, both hemispheres 20.2
1963 Male, age 80, left hemisphere 15.7
2249 Male, age 74, both hemispheres 15.4
2113 Female, age 91, right hemisphere 14.5
1940 Female, age 85, left hemisphere 14.0
2437 Female, age 94, left hemisphere 13.4
Hippocampus, CA3
nTPM: 19.7
2137 Male, age 80, left hemisphere 25.3
2620 Female, age 94, left hemisphere 22.1
1891 Female, age 85, both hemispheres 19.1
2861 Female, age 67, both hemispheres 18.9
2436 Male, age 74, both hemispheres 17.5
1867 Male, age 76, both hemispheres 15.6
Parahippocampal cortex
nTPM: 16.8
2018 Male, age 76, both hemispheres 19.8
2532 Female, age 72, left hemisphere 19.4
1850 Male, age 80, both hemispheres 19.2
2245 Female, age 91, both hemispheres 17.7
1933 Female, age 85, both hemispheres 17.6
2693 Female, age 94, both hemispheres 15.8
2250 Female, age 67, right hemisphere 15.7
1990 Female, age 91, right hemisphere 15.4
2692 Male, age 74, both hemispheres 13.8
2622 Female, age 67, right hemisphere 13.5
Perirhinal gyrus
nTPM: 18.2
1841 Female, age 85, right hemisphere 20.3
1794 Male, age 80, right hemisphere 19.3
2848 Male, age 76, right hemisphere 18.8
1847 Female, age 91, left hemisphere 16.4
2521 Female, age 94, right hemisphere 16.0
Subiculum
nTPM: 16.7
2438 Female, age 94, left hemisphere 20.4
1901 Male, age 80, both hemispheres 17.6
1977 Female, age 85, both hemispheres 17.4
2042 Male, age 76, both hemispheres 16.7
2619 Male, age 74, both hemispheres 15.1
2729 Female, age 91, right hemisphere 13.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.4
Samples: 197

Max nTPM: 29.6
Min nTPM: 10.3
Std nTPM: 3.6
Median nTPM: 16.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 29.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 29.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 28.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 28.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 26.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 25.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 24.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 24.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 23.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 23.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 23.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.4
FF:10169-103B7 60 years, female 75.3
FF:10153-102I9 76 years, female 73.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 37.4
Samples: 4

Max nTPM: 39.6
Min nTPM: 32.9
Sample A Female 39.6
Sample B Female 39.5
Sample C Male 32.9
Sample D Male 37.4
Entorhinal cortex
nTPM: 36.7
Samples: 4

Max nTPM: 39.9
Min nTPM: 33.2
Sample A Female 39.9
Sample B Female 33.2
Sample C Male 36.3
Sample D Male 37.5
Subiculum
nTPM: 36.5
Samples: 4

Max nTPM: 39.4
Min nTPM: 34.2
Sample A Female 39.4
Sample B Female 34.2
Sample C Male 37.5
Sample D Male 34.7
Ventral hippocampus
nTPM: 37.0
Samples: 4

Max nTPM: 41.3
Min nTPM: 33.7
Sample A Female 35.3
Sample B Female 33.7
Sample C Male 37.5
Sample D Male 41.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.3
Samples: 4

Max nTPM: 42.0
Min nTPM: 31.7
Sample A Male 31.7
Sample B Male 36.2
Sample C Female 35.4
Sample D Female 42.0
Hippocampal formation
nTPM: 34.7
Samples: 4

Max nTPM: 38.7
Min nTPM: 32.0
Sample A Male 32.0
Sample B Male 38.7
Sample C Female 36.0
Sample D Female 32.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
68798181 Antisense, RP_050215_01_H10, Mouse strain C57BL/6J (56 days, male) 0.8

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