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SFT2D1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:54.5 nTPM
HPA:54.5 nTPM
GTEx:62.9 nTPM
FANTOM5:53.4 Scaled Tags Per Million
Pig:33.4 nTPM
Mouse:20.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014677
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.5
Sample id Sample description nTPM
Hippocampus
nTPM: 53.9
1911 Female, age 85, right hemisphere 56.1
1898 Male, age 80, left hemisphere 55.2
2529 Female, age 94, left hemisphere 55.1
1855 Male, age 76, left hemisphere 53.3
2148 Female, age 91, left hemisphere 51.8
2621 Female, age 67, right hemisphere 51.7
Dentate gyrus
nTPM: 52.9
2528 Male, age 74, both hemispheres 56.3
2530 Female, age 94, left hemisphere 54.5
2010 Male, age 76, both hemispheres 53.5
2246 Female, age 85, both hemispheres 51.8
1927 Female, age 91, both hemispheres 51.7
2531 Female, age 67, both hemispheres 49.4
Entorhinal gyrus
nTPM: 52.7
2117 Female, age 91, right hemisphere 56.5
1938 Female, age 85, left hemisphere 54.8
1787 Male, age 76, left hemisphere 52.5
2764 Male, age 80, right hemisphere 52.5
2686 Male, age 75, right hemisphere 50.4
2613 Female, age 94, left hemisphere 49.4
Hippocampus, CA1
nTPM: 52.8
1873 Female, age 85, both hemispheres 54.8
2527 Male, age 74, both hemispheres 54.4
2082 Female, age 91, right hemisphere 52.1
2045 Male, age 76, both hemispheres 51.4
2749 Male, age 80, left hemisphere 51.4
Hippocampus, CA2
nTPM: 54.5
2249 Male, age 74, both hemispheres 58.8
1963 Male, age 80, left hemisphere 54.4
2437 Female, age 94, left hemisphere 54.2
1940 Female, age 85, left hemisphere 53.9
2113 Female, age 91, right hemisphere 53.0
1892 Male, age 76, both hemispheres 52.6
Hippocampus, CA3
nTPM: 52.4
1891 Female, age 85, both hemispheres 55.9
1867 Male, age 76, both hemispheres 54.5
2436 Male, age 74, both hemispheres 54.4
2137 Male, age 80, left hemisphere 51.5
2861 Female, age 67, both hemispheres 49.2
2620 Female, age 94, left hemisphere 49.0
Parahippocampal cortex
nTPM: 52.5
1850 Male, age 80, both hemispheres 54.3
2250 Female, age 67, right hemisphere 54.1
1933 Female, age 85, both hemispheres 53.6
1990 Female, age 91, right hemisphere 53.6
2692 Male, age 74, both hemispheres 52.9
2693 Female, age 94, both hemispheres 52.7
2018 Male, age 76, both hemispheres 52.4
2532 Female, age 72, left hemisphere 51.3
2245 Female, age 91, both hemispheres 50.9
2622 Female, age 67, right hemisphere 48.6
Perirhinal gyrus
nTPM: 52.0
1841 Female, age 85, right hemisphere 53.1
2521 Female, age 94, right hemisphere 52.1
1847 Female, age 91, left hemisphere 52.0
2848 Male, age 76, right hemisphere 51.6
1794 Male, age 80, right hemisphere 51.5
Subiculum
nTPM: 54.3
1901 Male, age 80, both hemispheres 56.4
2042 Male, age 76, both hemispheres 56.2
1977 Female, age 85, both hemispheres 54.5
2729 Female, age 91, right hemisphere 53.7
2619 Male, age 74, both hemispheres 52.5
2438 Female, age 94, left hemisphere 52.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.9
Samples: 197

Max nTPM: 157.0
Min nTPM: 24.6
Std nTPM: 20.1
Median nTPM: 60.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 157.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 141.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 124.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 123.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 114.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 111.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 110.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 105.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 100.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 99.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 98.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.4
FF:10169-103B7 60 years, female 54.4
FF:10153-102I9 76 years, female 52.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 47.5
Min nTPM: 22.0
Sample A Female 47.5
Sample B Female 26.1
Sample C Male 37.9
Sample D Male 22.0
Entorhinal cortex
nTPM: 21.2
Samples: 4

Max nTPM: 27.4
Min nTPM: 16.3
Sample A Female 19.2
Sample B Female 27.4
Sample C Male 21.7
Sample D Male 16.3
Subiculum
nTPM: 25.8
Samples: 4

Max nTPM: 27.5
Min nTPM: 22.2
Sample A Female 27.5
Sample B Female 27.4
Sample C Male 22.2
Sample D Male 26.0
Ventral hippocampus
nTPM: 27.0
Samples: 4

Max nTPM: 31.0
Min nTPM: 21.5
Sample A Female 27.5
Sample B Female 21.5
Sample C Male 28.1
Sample D Male 31.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.0
Samples: 4

Max nTPM: 22.0
Min nTPM: 17.3
Sample A Male 22.0
Sample B Male 19.2
Sample C Female 21.5
Sample D Female 17.3
Hippocampal formation
nTPM: 20.6
Samples: 4

Max nTPM: 22.2
Min nTPM: 19.2
Sample A Male 19.2
Sample B Male 20.6
Sample C Female 20.3
Sample D Female 22.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.