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INPP5F
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:50.6 nTPM
HPA:50.6 nTPM
GTEx:49.9 nTPM
FANTOM5:168.7 Scaled Tags Per Million
Pig:148.1 nTPM
Mouse:65.7 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.6
Sample id Sample description nTPM
Hippocampus
nTPM: 27.9
1898 Male, age 80, left hemisphere 43.1
2621 Female, age 67, right hemisphere 33.4
1855 Male, age 76, left hemisphere 27.6
2148 Female, age 91, left hemisphere 24.2
2529 Female, age 94, left hemisphere 21.2
1911 Female, age 85, right hemisphere 17.9
Dentate gyrus
nTPM: 31.1
1927 Female, age 91, both hemispheres 46.9
2010 Male, age 76, both hemispheres 35.9
2530 Female, age 94, left hemisphere 34.2
2246 Female, age 85, both hemispheres 26.0
2528 Male, age 74, both hemispheres 25.3
2531 Female, age 67, both hemispheres 18.3
Entorhinal gyrus
nTPM: 35.8
1938 Female, age 85, left hemisphere 46.2
2764 Male, age 80, right hemisphere 41.2
1787 Male, age 76, left hemisphere 39.3
2613 Female, age 94, left hemisphere 38.7
2686 Male, age 75, right hemisphere 26.8
2117 Female, age 91, right hemisphere 22.9
Hippocampus, CA1
nTPM: 30.7
2749 Male, age 80, left hemisphere 48.8
1873 Female, age 85, both hemispheres 35.8
2527 Male, age 74, both hemispheres 26.1
2045 Male, age 76, both hemispheres 21.8
2082 Female, age 91, right hemisphere 20.8
Hippocampus, CA2
nTPM: 32.7
1892 Male, age 76, both hemispheres 51.2
1963 Male, age 80, left hemisphere 48.1
2437 Female, age 94, left hemisphere 31.9
1940 Female, age 85, left hemisphere 24.4
2249 Male, age 74, both hemispheres 22.9
2113 Female, age 91, right hemisphere 17.4
Hippocampus, CA3
nTPM: 27.4
1867 Male, age 76, both hemispheres 39.1
2137 Male, age 80, left hemisphere 34.8
1891 Female, age 85, both hemispheres 26.1
2436 Male, age 74, both hemispheres 22.1
2861 Female, age 67, both hemispheres 21.6
2620 Female, age 94, left hemisphere 20.9
Parahippocampal cortex
nTPM: 34.3
1990 Female, age 91, right hemisphere 54.2
1850 Male, age 80, both hemispheres 49.7
2693 Female, age 94, both hemispheres 38.9
2250 Female, age 67, right hemisphere 35.7
1933 Female, age 85, both hemispheres 32.0
2245 Female, age 91, both hemispheres 30.8
2692 Male, age 74, both hemispheres 27.4
2532 Female, age 72, left hemisphere 26.8
2018 Male, age 76, both hemispheres 24.1
2622 Female, age 67, right hemisphere 23.0
Perirhinal gyrus
nTPM: 50.6
1847 Female, age 91, left hemisphere 75.7
1794 Male, age 80, right hemisphere 48.7
2521 Female, age 94, right hemisphere 45.3
1841 Female, age 85, right hemisphere 43.7
2848 Male, age 76, right hemisphere 39.7
Subiculum
nTPM: 27.4
1977 Female, age 85, both hemispheres 41.7
1901 Male, age 80, both hemispheres 31.4
2619 Male, age 74, both hemispheres 29.0
2438 Female, age 94, left hemisphere 28.3
2042 Male, age 76, both hemispheres 17.6
2729 Female, age 91, right hemisphere 16.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.9
Samples: 197

Max nTPM: 152.5
Min nTPM: 10.3
Std nTPM: 31.7
Median nTPM: 40.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 152.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 146.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 142.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 125.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 124.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 119.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 118.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 117.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 116.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 116.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 115.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 168.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 168.7
FF:10169-103B7 60 years, female 257.4
FF:10153-102I9 76 years, female 80.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 148.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 148.1
Samples: 4

Max nTPM: 187.6
Min nTPM: 99.1
Sample A Female 187.6
Sample B Female 156.7
Sample C Male 149.1
Sample D Male 99.1
Entorhinal cortex
nTPM: 147.3
Samples: 4

Max nTPM: 185.9
Min nTPM: 117.1
Sample A Female 154.5
Sample B Female 185.9
Sample C Male 117.1
Sample D Male 131.6
Subiculum
nTPM: 131.7
Samples: 4

Max nTPM: 206.2
Min nTPM: 99.3
Sample A Female 206.2
Sample B Female 107.5
Sample C Male 113.6
Sample D Male 99.3
Ventral hippocampus
nTPM: 137.0
Samples: 4

Max nTPM: 182.0
Min nTPM: 86.7
Sample A Female 182.0
Sample B Female 86.7
Sample C Male 124.1
Sample D Male 155.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.8
Samples: 4

Max nTPM: 57.9
Min nTPM: 44.0
Sample A Male 56.4
Sample B Male 56.8
Sample C Female 57.9
Sample D Female 44.0
Hippocampal formation
nTPM: 65.7
Samples: 4

Max nTPM: 74.3
Min nTPM: 57.5
Sample A Male 61.3
Sample B Male 69.8
Sample C Female 74.3
Sample D Female 57.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
69133785 Antisense, RP_050321_02_C08, Mouse strain C57BL/6J (56 days, male) 4.2

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