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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:46.0 nTPM
HPA:46.0 nTPM
GTEx:51.3 nTPM
FANTOM5:175.2 Scaled Tags Per Million
Pig:75.9 nTPM
Mouse:163.5 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039780
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.0
Sample id Sample description nTPM
Hippocampus
nTPM: 42.3
1898 Male, age 80, left hemisphere 50.1
1855 Male, age 76, left hemisphere 45.2
1911 Female, age 85, right hemisphere 41.8
2621 Female, age 67, right hemisphere 40.0
2148 Female, age 91, left hemisphere 38.8
2529 Female, age 94, left hemisphere 37.8
Dentate gyrus
nTPM: 42.7
2010 Male, age 76, both hemispheres 48.4
1927 Female, age 91, both hemispheres 45.5
2530 Female, age 94, left hemisphere 43.6
2528 Male, age 74, both hemispheres 42.6
2246 Female, age 85, both hemispheres 40.9
2531 Female, age 67, both hemispheres 35.4
Entorhinal gyrus
nTPM: 41.2
1938 Female, age 85, left hemisphere 46.5
2117 Female, age 91, right hemisphere 43.5
1787 Male, age 76, left hemisphere 42.7
2613 Female, age 94, left hemisphere 41.3
2764 Male, age 80, right hemisphere 40.0
2686 Male, age 75, right hemisphere 33.0
Hippocampus, CA1
nTPM: 46.0
2749 Male, age 80, left hemisphere 56.9
1873 Female, age 85, both hemispheres 46.2
2527 Male, age 74, both hemispheres 44.9
2045 Male, age 76, both hemispheres 43.4
2082 Female, age 91, right hemisphere 38.7
Hippocampus, CA2
nTPM: 43.5
1892 Male, age 76, both hemispheres 50.3
2249 Male, age 74, both hemispheres 45.8
1963 Male, age 80, left hemisphere 45.0
1940 Female, age 85, left hemisphere 41.3
2437 Female, age 94, left hemisphere 39.2
2113 Female, age 91, right hemisphere 39.1
Hippocampus, CA3
nTPM: 42.5
1867 Male, age 76, both hemispheres 48.2
2137 Male, age 80, left hemisphere 48.1
2436 Male, age 74, both hemispheres 43.6
1891 Female, age 85, both hemispheres 43.4
2620 Female, age 94, left hemisphere 37.6
2861 Female, age 67, both hemispheres 34.1
Parahippocampal cortex
nTPM: 40.9
1850 Male, age 80, both hemispheres 47.0
1933 Female, age 85, both hemispheres 44.0
2018 Male, age 76, both hemispheres 43.1
1990 Female, age 91, right hemisphere 42.9
2693 Female, age 94, both hemispheres 40.6
2692 Male, age 74, both hemispheres 39.9
2250 Female, age 67, right hemisphere 39.6
2532 Female, age 72, left hemisphere 39.3
2245 Female, age 91, both hemispheres 38.9
2622 Female, age 67, right hemisphere 33.6
Perirhinal gyrus
nTPM: 43.9
1847 Female, age 91, left hemisphere 46.1
1794 Male, age 80, right hemisphere 45.6
1841 Female, age 85, right hemisphere 44.5
2521 Female, age 94, right hemisphere 42.5
2848 Male, age 76, right hemisphere 40.9
Subiculum
nTPM: 42.0
1901 Male, age 80, both hemispheres 44.5
2042 Male, age 76, both hemispheres 43.9
1977 Female, age 85, both hemispheres 43.6
2619 Male, age 74, both hemispheres 40.3
2729 Female, age 91, right hemisphere 39.9
2438 Female, age 94, left hemisphere 39.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.3
Samples: 197

Max nTPM: 89.8
Min nTPM: 26.0
Std nTPM: 10.8
Median nTPM: 51.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 89.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 80.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 77.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 75.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 75.5
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 75.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 75.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 73.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 73.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 72.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 72.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 175.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 175.2
FF:10169-103B7 60 years, female 211.3
FF:10153-102I9 76 years, female 139.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 75.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 75.9
Samples: 4

Max nTPM: 95.2
Min nTPM: 54.4
Sample A Female 95.2
Sample B Female 72.9
Sample C Male 81.1
Sample D Male 54.4
Entorhinal cortex
nTPM: 58.9
Samples: 4

Max nTPM: 67.3
Min nTPM: 50.2
Sample A Female 59.4
Sample B Female 67.3
Sample C Male 58.8
Sample D Male 50.2
Subiculum
nTPM: 60.6
Samples: 4

Max nTPM: 73.6
Min nTPM: 53.4
Sample A Female 73.6
Sample B Female 53.4
Sample C Male 55.0
Sample D Male 60.3
Ventral hippocampus
nTPM: 64.1
Samples: 4

Max nTPM: 77.4
Min nTPM: 48.9
Sample A Female 77.4
Sample B Female 48.9
Sample C Male 61.6
Sample D Male 68.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 163.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 158.4
Samples: 4

Max nTPM: 161.0
Min nTPM: 152.5
Sample A Male 152.5
Sample B Male 160.6
Sample C Female 161.0
Sample D Female 159.6
Hippocampal formation
nTPM: 163.5
Samples: 4

Max nTPM: 171.6
Min nTPM: 157.3
Sample A Male 171.6
Sample B Male 159.0
Sample C Female 166.2
Sample D Female 157.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
68545935 Antisense, RP_050120_01_G04, Mouse strain C57BL/6J (56 days, male) 5.3

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The Human Protein Atlas

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