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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:55.5 nTPM
HPA:55.5 nTPM
GTEx:47.6 nTPM
FANTOM5:135.9 Scaled Tags Per Million
Pig:23.5 nTPM
Mouse:73.8 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061273Antibody HPA067885
Glial cells MediumNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.5
Sample id Sample description nTPM
Hippocampus
nTPM: 53.6
1898 Male, age 80, left hemisphere 56.8
1855 Male, age 76, left hemisphere 55.6
2148 Female, age 91, left hemisphere 55.3
2621 Female, age 67, right hemisphere 53.3
2529 Female, age 94, left hemisphere 53.1
1911 Female, age 85, right hemisphere 47.3
Dentate gyrus
nTPM: 50.9
2528 Male, age 74, both hemispheres 55.7
2246 Female, age 85, both hemispheres 54.0
2530 Female, age 94, left hemisphere 53.3
2531 Female, age 67, both hemispheres 50.5
2010 Male, age 76, both hemispheres 47.3
1927 Female, age 91, both hemispheres 44.8
Entorhinal gyrus
nTPM: 55.5
2117 Female, age 91, right hemisphere 62.2
2764 Male, age 80, right hemisphere 59.8
2686 Male, age 75, right hemisphere 57.6
2613 Female, age 94, left hemisphere 53.3
1938 Female, age 85, left hemisphere 50.5
1787 Male, age 76, left hemisphere 49.7
Hippocampus, CA1
nTPM: 51.0
2527 Male, age 74, both hemispheres 57.0
2045 Male, age 76, both hemispheres 54.3
2749 Male, age 80, left hemisphere 49.8
1873 Female, age 85, both hemispheres 48.7
2082 Female, age 91, right hemisphere 45.3
Hippocampus, CA2
nTPM: 49.0
1940 Female, age 85, left hemisphere 52.1
2113 Female, age 91, right hemisphere 51.0
2249 Male, age 74, both hemispheres 50.9
1963 Male, age 80, left hemisphere 48.9
2437 Female, age 94, left hemisphere 47.8
1892 Male, age 76, both hemispheres 43.4
Hippocampus, CA3
nTPM: 50.8
2861 Female, age 67, both hemispheres 61.1
2620 Female, age 94, left hemisphere 59.9
1891 Female, age 85, both hemispheres 51.6
1867 Male, age 76, both hemispheres 46.7
2137 Male, age 80, left hemisphere 43.8
2436 Male, age 74, both hemispheres 41.5
Parahippocampal cortex
nTPM: 51.8
2692 Male, age 74, both hemispheres 62.8
2622 Female, age 67, right hemisphere 56.0
1933 Female, age 85, both hemispheres 51.8
1990 Female, age 91, right hemisphere 51.6
1850 Male, age 80, both hemispheres 50.5
2532 Female, age 72, left hemisphere 50.5
2018 Male, age 76, both hemispheres 49.8
2693 Female, age 94, both hemispheres 49.7
2245 Female, age 91, both hemispheres 48.5
2250 Female, age 67, right hemisphere 46.9
Perirhinal gyrus
nTPM: 51.8
1794 Male, age 80, right hemisphere 58.4
2521 Female, age 94, right hemisphere 55.7
1847 Female, age 91, left hemisphere 50.0
1841 Female, age 85, right hemisphere 48.2
2848 Male, age 76, right hemisphere 47.0
Subiculum
nTPM: 54.1
2619 Male, age 74, both hemispheres 59.9
2729 Female, age 91, right hemisphere 57.7
1977 Female, age 85, both hemispheres 55.6
1901 Male, age 80, both hemispheres 51.3
2042 Male, age 76, both hemispheres 50.7
2438 Female, age 94, left hemisphere 49.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.6
Samples: 197

Max nTPM: 85.9
Min nTPM: 11.9
Std nTPM: 14.3
Median nTPM: 46.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 85.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 82.0
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 81.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 78.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 77.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 76.3
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 75.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 75.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 73.3
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 71.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 70.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 135.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 135.9
FF:10169-103B7 60 years, female 154.8
FF:10153-102I9 76 years, female 117.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 21.7
Min nTPM: 14.4
Sample A Female 17.1
Sample B Female 14.4
Sample C Male 21.7
Sample D Male 16.5
Entorhinal cortex
nTPM: 23.5
Samples: 4

Max nTPM: 25.5
Min nTPM: 21.2
Sample A Female 21.2
Sample B Female 23.4
Sample C Male 25.5
Sample D Male 23.7
Subiculum
nTPM: 22.1
Samples: 4

Max nTPM: 26.7
Min nTPM: 20.2
Sample A Female 26.7
Sample B Female 20.2
Sample C Male 20.3
Sample D Male 21.0
Ventral hippocampus
nTPM: 15.0
Samples: 4

Max nTPM: 17.6
Min nTPM: 11.9
Sample A Female 11.9
Sample B Female 13.6
Sample C Male 16.7
Sample D Male 17.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.9
Samples: 4

Max nTPM: 81.9
Min nTPM: 64.3
Sample A Male 74.0
Sample B Male 75.2
Sample C Female 64.3
Sample D Female 81.9
Hippocampal formation
nTPM: 59.3
Samples: 4

Max nTPM: 69.1
Min nTPM: 47.6
Sample A Male 60.9
Sample B Male 47.6
Sample C Female 69.1
Sample D Female 59.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
72283504 Antisense, RP_051019_01_E08, Mouse strain C57BL/6J (56 days, male) 0.3

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