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L1CAM
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:12.6 nTPM
HPA:12.6 nTPM
GTEx:18.3 nTPM
FANTOM5:94.5 Scaled Tags Per Million
Pig:52.4 nTPM
Mouse:53.6 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB010896
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.6
Sample id Sample description nTPM
Hippocampus
nTPM: 0.0
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
Dentate gyrus
nTPM: 0.0
1927 Female, age 91, both hemispheres 0.0
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 12.6
2613 Female, age 94, left hemisphere 49.8
2686 Male, age 75, right hemisphere 13.3
2764 Male, age 80, right hemisphere 12.2
1787 Male, age 76, left hemisphere 0.5
1938 Female, age 85, left hemisphere 0.1
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 0.0
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 0.0
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 0.1
2620 Female, age 94, left hemisphere 0.8
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 5.8
2622 Female, age 67, right hemisphere 24.7
2693 Female, age 94, both hemispheres 19.4
1850 Male, age 80, both hemispheres 7.2
2245 Female, age 91, both hemispheres 4.1
1990 Female, age 91, right hemisphere 2.5
1933 Female, age 85, both hemispheres 0.0
2018 Male, age 76, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2532 Female, age 72, left hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 10.9
1847 Female, age 91, left hemisphere 21.1
1794 Male, age 80, right hemisphere 14.9
2848 Male, age 76, right hemisphere 11.2
2521 Female, age 94, right hemisphere 6.9
1841 Female, age 85, right hemisphere 0.4
Subiculum
nTPM: 0.0
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.3
Samples: 197

Max nTPM: 61.6
Min nTPM: 1.0
Std nTPM: 13.5
Median nTPM: 14.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 61.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 56.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 55.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 54.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 52.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 48.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 47.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 47.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 46.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 45.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 45.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.5
FF:10169-103B7 60 years, female 108.8
FF:10153-102I9 76 years, female 80.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 37.8
Samples: 4

Max nTPM: 49.2
Min nTPM: 24.8
Sample A Female 48.8
Sample B Female 49.2
Sample C Male 28.5
Sample D Male 24.8
Entorhinal cortex
nTPM: 46.7
Samples: 4

Max nTPM: 53.8
Min nTPM: 35.2
Sample A Female 52.1
Sample B Female 35.2
Sample C Male 53.8
Sample D Male 45.6
Subiculum
nTPM: 52.4
Samples: 4

Max nTPM: 69.0
Min nTPM: 43.1
Sample A Female 69.0
Sample B Female 43.1
Sample C Male 54.2
Sample D Male 43.2
Ventral hippocampus
nTPM: 42.5
Samples: 4

Max nTPM: 60.7
Min nTPM: 29.8
Sample A Female 43.1
Sample B Female 29.8
Sample C Male 60.7
Sample D Male 36.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.6
Samples: 4

Max nTPM: 77.3
Min nTPM: 42.5
Sample A Male 42.5
Sample B Male 46.1
Sample C Female 48.4
Sample D Female 77.3
Hippocampal formation
nTPM: 35.8
Samples: 4

Max nTPM: 39.4
Min nTPM: 30.7
Sample A Male 30.7
Sample B Male 38.5
Sample C Female 39.4
Sample D Female 34.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
79591595 Antisense, RP_071204_04_D07, Mouse strain C57BL/6J (56 days, male) 6.0
80342072 Antisense, RP_071204_04_D07, Mouse strain C57BL/6J (56 days, male) 3.6
620 Antisense, RP_Baylor_102880, Mouse strain C57BL/6J (56 days, male) 1.4
621 Antisense, RP_Baylor_102880, Mouse strain C57BL/6J (56 days, male) 1.1
622 Sense, RPS_Baylor_37010, Mouse strain C57BL/6J (56 days, male) 0.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.