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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:51.8 nTPM
HPA:51.8 nTPM
GTEx:60.2 nTPM
FANTOM5:229.7 Scaled Tags Per Million
Pig:80.2 nTPM
Mouse:64.4 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031962
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.8
Sample id Sample description nTPM
Hippocampus
nTPM: 47.2
2621 Female, age 67, right hemisphere 59.3
2148 Female, age 91, left hemisphere 57.6
1898 Male, age 80, left hemisphere 54.8
1855 Male, age 76, left hemisphere 48.0
1911 Female, age 85, right hemisphere 31.8
2529 Female, age 94, left hemisphere 31.7
Dentate gyrus
nTPM: 51.8
2530 Female, age 94, left hemisphere 68.5
1927 Female, age 91, both hemispheres 56.7
2531 Female, age 67, both hemispheres 53.8
2010 Male, age 76, both hemispheres 51.4
2246 Female, age 85, both hemispheres 44.6
2528 Male, age 74, both hemispheres 35.6
Entorhinal gyrus
nTPM: 40.7
2686 Male, age 75, right hemisphere 50.9
2764 Male, age 80, right hemisphere 49.1
2613 Female, age 94, left hemisphere 47.2
1938 Female, age 85, left hemisphere 39.5
1787 Male, age 76, left hemisphere 34.4
2117 Female, age 91, right hemisphere 23.2
Hippocampus, CA1
nTPM: 48.3
2749 Male, age 80, left hemisphere 82.0
1873 Female, age 85, both hemispheres 58.2
2045 Male, age 76, both hemispheres 38.4
2527 Male, age 74, both hemispheres 33.7
2082 Female, age 91, right hemisphere 29.2
Hippocampus, CA2
nTPM: 43.5
1963 Male, age 80, left hemisphere 75.3
1892 Male, age 76, both hemispheres 46.1
2437 Female, age 94, left hemisphere 45.4
1940 Female, age 85, left hemisphere 35.3
2113 Female, age 91, right hemisphere 31.2
2249 Male, age 74, both hemispheres 27.5
Hippocampus, CA3
nTPM: 50.8
2861 Female, age 67, both hemispheres 84.2
2620 Female, age 94, left hemisphere 77.7
2137 Male, age 80, left hemisphere 61.1
1867 Male, age 76, both hemispheres 29.0
1891 Female, age 85, both hemispheres 28.9
2436 Male, age 74, both hemispheres 23.9
Parahippocampal cortex
nTPM: 39.1
2622 Female, age 67, right hemisphere 61.7
2693 Female, age 94, both hemispheres 51.6
1933 Female, age 85, both hemispheres 48.0
2245 Female, age 91, both hemispheres 47.2
1850 Male, age 80, both hemispheres 39.5
2250 Female, age 67, right hemisphere 38.2
2532 Female, age 72, left hemisphere 37.3
1990 Female, age 91, right hemisphere 25.1
2692 Male, age 74, both hemispheres 22.2
2018 Male, age 76, both hemispheres 20.5
Perirhinal gyrus
nTPM: 44.2
1794 Male, age 80, right hemisphere 52.8
2521 Female, age 94, right hemisphere 52.8
1847 Female, age 91, left hemisphere 41.2
1841 Female, age 85, right hemisphere 40.6
2848 Male, age 76, right hemisphere 33.7
Subiculum
nTPM: 26.7
1977 Female, age 85, both hemispheres 37.5
2729 Female, age 91, right hemisphere 26.6
2042 Male, age 76, both hemispheres 26.1
1901 Male, age 80, both hemispheres 25.4
2619 Male, age 74, both hemispheres 25.3
2438 Female, age 94, left hemisphere 19.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.2
Samples: 197

Max nTPM: 136.9
Min nTPM: 11.8
Std nTPM: 25.6
Median nTPM: 54.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 136.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 125.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 124.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 120.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 118.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 117.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 117.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 116.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 116.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 115.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 115.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 229.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 229.7
FF:10169-103B7 60 years, female 282.5
FF:10153-102I9 76 years, female 176.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 80.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 72.2
Samples: 4

Max nTPM: 90.1
Min nTPM: 52.0
Sample A Female 90.1
Sample B Female 75.4
Sample C Male 71.4
Sample D Male 52.0
Entorhinal cortex
nTPM: 70.5
Samples: 4

Max nTPM: 77.8
Min nTPM: 58.8
Sample A Female 77.8
Sample B Female 58.8
Sample C Male 77.8
Sample D Male 67.7
Subiculum
nTPM: 74.1
Samples: 4

Max nTPM: 92.9
Min nTPM: 61.4
Sample A Female 92.9
Sample B Female 64.3
Sample C Male 77.9
Sample D Male 61.4
Ventral hippocampus
nTPM: 80.2
Samples: 4

Max nTPM: 103.3
Min nTPM: 54.2
Sample A Female 73.8
Sample B Female 54.2
Sample C Male 103.3
Sample D Male 89.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.4
Samples: 4

Max nTPM: 82.5
Min nTPM: 53.8
Sample A Male 60.8
Sample B Male 60.6
Sample C Female 53.8
Sample D Female 82.5
Hippocampal formation
nTPM: 58.9
Samples: 4

Max nTPM: 66.0
Min nTPM: 50.5
Sample A Male 50.5
Sample B Male 60.2
Sample C Female 66.0
Sample D Female 59.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
70439177 Antisense, RP_050614_03_D01, Mouse strain C57BL/6J (56 days, male) 3.1

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