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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:15.5 nTPM
HPA:15.5 nTPM
GTEx:12.0 nTPM
FANTOM5:76.5 Scaled Tags Per Million
Pig:18.7 nTPM
Mouse:22.7 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002725Antibody HPA023885Antibody CAB000119
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.5
Sample id Sample description nTPM
Hippocampus
nTPM: 9.4
1911 Female, age 85, right hemisphere 15.1
2621 Female, age 67, right hemisphere 13.7
1855 Male, age 76, left hemisphere 8.6
2148 Female, age 91, left hemisphere 7.5
1898 Male, age 80, left hemisphere 6.1
2529 Female, age 94, left hemisphere 5.3
Dentate gyrus
nTPM: 9.8
2246 Female, age 85, both hemispheres 15.5
1927 Female, age 91, both hemispheres 15.4
2531 Female, age 67, both hemispheres 12.6
2010 Male, age 76, both hemispheres 8.1
2528 Male, age 74, both hemispheres 4.6
2530 Female, age 94, left hemisphere 2.6
Entorhinal gyrus
nTPM: 10.0
2686 Male, age 75, right hemisphere 17.6
2613 Female, age 94, left hemisphere 16.1
1938 Female, age 85, left hemisphere 12.0
2764 Male, age 80, right hemisphere 9.8
1787 Male, age 76, left hemisphere 4.5
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 15.5
2749 Male, age 80, left hemisphere 26.0
2045 Male, age 76, both hemispheres 18.7
2082 Female, age 91, right hemisphere 11.7
2527 Male, age 74, both hemispheres 11.6
1873 Female, age 85, both hemispheres 9.7
Hippocampus, CA2
nTPM: 9.9
1892 Male, age 76, both hemispheres 17.4
2113 Female, age 91, right hemisphere 12.4
2249 Male, age 74, both hemispheres 8.7
1940 Female, age 85, left hemisphere 8.4
1963 Male, age 80, left hemisphere 8.1
2437 Female, age 94, left hemisphere 4.6
Hippocampus, CA3
nTPM: 14.9
2137 Male, age 80, left hemisphere 31.7
1867 Male, age 76, both hemispheres 15.3
2861 Female, age 67, both hemispheres 14.2
2620 Female, age 94, left hemisphere 12.9
2436 Male, age 74, both hemispheres 8.4
1891 Female, age 85, both hemispheres 6.9
Parahippocampal cortex
nTPM: 10.3
2622 Female, age 67, right hemisphere 19.4
1850 Male, age 80, both hemispheres 16.6
2532 Female, age 72, left hemisphere 14.6
2693 Female, age 94, both hemispheres 13.2
2245 Female, age 91, both hemispheres 12.4
1933 Female, age 85, both hemispheres 7.6
2018 Male, age 76, both hemispheres 7.3
2692 Male, age 74, both hemispheres 6.7
2250 Female, age 67, right hemisphere 3.0
1990 Female, age 91, right hemisphere 2.7
Perirhinal gyrus
nTPM: 12.4
2848 Male, age 76, right hemisphere 22.1
1794 Male, age 80, right hemisphere 15.6
1841 Female, age 85, right hemisphere 13.9
1847 Female, age 91, left hemisphere 6.2
2521 Female, age 94, right hemisphere 4.1
Subiculum
nTPM: 6.5
1901 Male, age 80, both hemispheres 11.9
2438 Female, age 94, left hemisphere 10.8
1977 Female, age 85, both hemispheres 6.6
2042 Male, age 76, both hemispheres 5.8
2619 Male, age 74, both hemispheres 2.6
2729 Female, age 91, right hemisphere 1.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.0
Samples: 197

Max nTPM: 22.3
Min nTPM: 5.7
Std nTPM: 2.9
Median nTPM: 11.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 22.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 22.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 21.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 21.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 20.3
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 19.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 18.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 18.0
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 16.9
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 16.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 16.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.5
FF:10153-102I9 76 years, female 84.1
FF:10169-103B7 60 years, female 69.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.2
Samples: 4

Max nTPM: 18.2
Min nTPM: 14.8
Sample A Female 18.2
Sample B Female 17.5
Sample C Male 18.2
Sample D Male 14.8
Entorhinal cortex
nTPM: 17.7
Samples: 4

Max nTPM: 18.4
Min nTPM: 16.7
Sample A Female 18.2
Sample B Female 16.7
Sample C Male 18.4
Sample D Male 17.4
Subiculum
nTPM: 18.7
Samples: 4

Max nTPM: 22.2
Min nTPM: 16.8
Sample A Female 22.2
Sample B Female 17.8
Sample C Male 18.0
Sample D Male 16.8
Ventral hippocampus
nTPM: 17.7
Samples: 4

Max nTPM: 21.8
Min nTPM: 14.6
Sample A Female 18.2
Sample B Female 16.0
Sample C Male 14.6
Sample D Male 21.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.8
Samples: 4

Max nTPM: 25.6
Min nTPM: 19.9
Sample A Male 23.7
Sample B Male 25.6
Sample C Female 21.8
Sample D Female 19.9
Hippocampal formation
nTPM: 21.2
Samples: 4

Max nTPM: 23.5
Min nTPM: 18.5
Sample A Male 22.8
Sample B Male 23.5
Sample C Female 20.1
Sample D Female 18.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69626915 Antisense, RP_050428_01_E08, Mouse strain C57BL/6J (56 days, male) 0.1

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