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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA037788
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Low
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 101.7
Min nTPM: 24.9
Std nTPM: 16.1
Median nTPM: 0.0
6_1
73 years, female
101.7
35_1
74 years, female
93.7
237_1
82 years, male
91.3
354_1
81 years, female
89.5
355_1
70 years, female
89.1
324_1
76 years, male
88.7
172_1
72 years, female
87.1
218_1
71 years, female
86.9
447_1
81 years, male
86.6
386_1
76 years, male
83.5
311_1
78 years, male
83.0
375_1
74 years, female
80.5
286_1
68 years, female
78.4
177_1
74 years, male
77.9
243_1
75 years, male
77.8
415_1
77 years, female
77.7
353_1
82 years, female
77.4
307_1
66 years, female
76.5
43_1
64 years, female
76.0
396_1
62 years, male
75.7
32_1
67 years, male
74.9
115_1
83 years, male
74.3
347_1
72 years, male
74.0
173_1
67 years, male
73.5
499_1
55 years, female
71.0
265_1
87 years, male
69.2
350_1
84 years, female
68.2
384_1
83 years, male
67.0
9_1
66 years, female
66.7
81_1
67 years, male
66.2
405_1
91 years, male
65.9
322_1
76 years, male
65.4
217_1
76 years, male
64.9
119_1
70 years, female
64.3
142_1
61 years, female
64.2
348_1
84 years, male
63.8
229_1
69 years, female
63.5
313_1
79 years, female
63.3
126_1
63 years, male
63.0
99_1
64 years, male
61.6
153_1
70 years, female
60.9
117_1
61 years, male
60.7
317_1
60 years, male
60.5
145_1
84 years, male
60.4
379_1
60 years, male
60.3
349_1
83 years, male
59.5
526_1
61 years, male
59.2
315_1
62 years, female
58.2
425_1
59 years, female
58.0
352_1
62 years, male
57.8
466_1
57 years, female
57.3
389_1
86 years, female
56.8
356_1
87 years, female
56.6
189_1
76 years, male
56.5
491_1
89 years, female
56.2
291_1
76 years, male
55.8
321_1
62 years, female
55.7
17_1
71 years, male
55.5
2_1
77 years, female
55.3
109_1
81 years, female
54.9
162_1
79 years, female
54.3
18_1
88 years, male
53.9
414_1
84 years, female
53.8
490_1
67 years, female
53.7
320_1
89 years, female
53.6
316_1
62 years, male
53.5
480_1
63 years, male
53.5
42_1
85 years, male
53.0
149_1
88 years, male
53.0
246_1
77 years, male
52.9
376_1
75 years, female
52.3
335_1
73 years, female
51.4
139_1
64 years, female
50.9
264_1
73 years, female
50.8
318_1
68 years, male
49.4
89_1
63 years, male
49.3
351_1
91 years, male
49.3
495_1
57 years, female
49.0
251_1
78 years, male
47.9
506_1
65 years, male
47.4
266_1
85 years, male
46.4
314_1
67 years, male
46.0
503_1
68 years, male
45.9
468_1
89 years, male
45.2
319_1
81 years, male
45.1
517_1
88 years, male
44.4
120_1
70 years, female
44.0
518_1
75 years, female
43.9
163_1
78 years, male
43.7
292_1
71 years, male
43.5
377_1
82 years, female
42.9
293_1
68 years, female
42.8
288_1
66 years, female
41.8
452_1
88 years, female
39.6
137_1
83 years, male
39.3
4_1
88 years, female
37.8
41_1
94 years, female
37.7
394_1
75 years, female
37.0
308_1
70 years, female
34.5
406_1
79 years, male
32.7
254_1
77 years, female
32.0
413_1
59 years, female
29.8
404_1
82 years, female
29.1
501_1
88 years, male
26.7
295_1
61 years, female
24.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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