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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:6.8 nTPM
HPA:6.8 nTPM
GTEx:20.4 nTPM
FANTOM5:15.4 Scaled Tags Per Million
Pig:11.5 nTPM
Mouse:14.9 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008736Antibody CAB002224Antibody CAB025546
Glial cells Not detectedLowNot detected
Neuronal cells MediumLowLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 6.8
Sample id Sample description nTPM
Hippocampus
nTPM: 4.5
1898 Male, age 80, left hemisphere 6.0
2621 Female, age 67, right hemisphere 5.9
1911 Female, age 85, right hemisphere 4.6
2148 Female, age 91, left hemisphere 3.9
1855 Male, age 76, left hemisphere 3.4
2529 Female, age 94, left hemisphere 2.9
Dentate gyrus
nTPM: 4.3
2531 Female, age 67, both hemispheres 6.4
1927 Female, age 91, both hemispheres 5.2
2010 Male, age 76, both hemispheres 4.6
2246 Female, age 85, both hemispheres 4.6
2530 Female, age 94, left hemisphere 2.9
2528 Male, age 74, both hemispheres 2.1
Entorhinal gyrus
nTPM: 4.0
2764 Male, age 80, right hemisphere 6.8
1787 Male, age 76, left hemisphere 4.1
2117 Female, age 91, right hemisphere 3.6
1938 Female, age 85, left hemisphere 3.5
2686 Male, age 75, right hemisphere 3.3
2613 Female, age 94, left hemisphere 2.7
Hippocampus, CA1
nTPM: 5.7
2082 Female, age 91, right hemisphere 6.6
2045 Male, age 76, both hemispheres 6.4
2749 Male, age 80, left hemisphere 5.5
2527 Male, age 74, both hemispheres 5.4
1873 Female, age 85, both hemispheres 4.5
Hippocampus, CA2
nTPM: 5.7
2113 Female, age 91, right hemisphere 7.4
2437 Female, age 94, left hemisphere 7.1
1963 Male, age 80, left hemisphere 5.8
2249 Male, age 74, both hemispheres 5.8
1892 Male, age 76, both hemispheres 4.6
1940 Female, age 85, left hemisphere 3.7
Hippocampus, CA3
nTPM: 4.9
2620 Female, age 94, left hemisphere 7.1
2137 Male, age 80, left hemisphere 6.1
1891 Female, age 85, both hemispheres 5.1
1867 Male, age 76, both hemispheres 5.0
2861 Female, age 67, both hemispheres 4.0
2436 Male, age 74, both hemispheres 2.2
Parahippocampal cortex
nTPM: 4.0
1990 Female, age 91, right hemisphere 6.4
2532 Female, age 72, left hemisphere 5.6
1850 Male, age 80, both hemispheres 4.9
2250 Female, age 67, right hemisphere 4.9
1933 Female, age 85, both hemispheres 4.3
2622 Female, age 67, right hemisphere 4.0
2018 Male, age 76, both hemispheres 3.4
2693 Female, age 94, both hemispheres 2.3
2245 Female, age 91, both hemispheres 2.2
2692 Male, age 74, both hemispheres 2.1
Perirhinal gyrus
nTPM: 4.7
2521 Female, age 94, right hemisphere 6.8
1794 Male, age 80, right hemisphere 5.7
2848 Male, age 76, right hemisphere 4.0
1847 Female, age 91, left hemisphere 3.9
1841 Female, age 85, right hemisphere 3.3
Subiculum
nTPM: 6.8
2438 Female, age 94, left hemisphere 9.8
2619 Male, age 74, both hemispheres 8.8
2729 Female, age 91, right hemisphere 6.6
2042 Male, age 76, both hemispheres 6.1
1977 Female, age 85, both hemispheres 5.3
1901 Male, age 80, both hemispheres 4.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.4
Samples: 197

Max nTPM: 36.8
Min nTPM: 11.7
Std nTPM: 3.7
Median nTPM: 20.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 36.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 35.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 32.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 31.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 29.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 29.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 28.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 27.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 27.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 26.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 26.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.4
FF:10169-103B7 60 years, female 15.6
FF:10153-102I9 76 years, female 15.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.3
Samples: 4

Max nTPM: 14.3
Min nTPM: 9.5
Sample A Female 14.3
Sample B Female 10.3
Sample C Male 11.1
Sample D Male 9.5
Entorhinal cortex
nTPM: 10.0
Samples: 4

Max nTPM: 10.7
Min nTPM: 9.3
Sample A Female 10.7
Sample B Female 9.3
Sample C Male 10.5
Sample D Male 9.4
Subiculum
nTPM: 10.8
Samples: 4

Max nTPM: 14.2
Min nTPM: 9.0
Sample A Female 14.2
Sample B Female 9.0
Sample C Male 10.2
Sample D Male 9.6
Ventral hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 14.5
Min nTPM: 8.7
Sample A Female 11.1
Sample B Female 8.7
Sample C Male 14.5
Sample D Male 11.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.9
Samples: 4

Max nTPM: 16.7
Min nTPM: 11.9
Sample A Male 16.7
Sample B Male 14.5
Sample C Female 16.6
Sample D Female 11.9
Hippocampal formation
nTPM: 14.5
Samples: 4

Max nTPM: 15.2
Min nTPM: 12.8
Sample A Male 12.8
Sample B Male 14.7
Sample C Female 15.1
Sample D Female 15.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69626630 Antisense, RP_050428_01_A07, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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