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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:8.1 nTPM
HPA:8.1 nTPM
GTEx:15.4 nTPM
FANTOM5:7.9 Scaled Tags Per Million
Pig:28.7 nTPM
Mouse:10.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056878Antibody HPA057019
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.1
Sample id Sample description nTPM
Hippocampus
nTPM: 8.1
2621 Female, age 67, right hemisphere 9.0
2529 Female, age 94, left hemisphere 8.9
1898 Male, age 80, left hemisphere 8.3
1911 Female, age 85, right hemisphere 7.8
1855 Male, age 76, left hemisphere 7.5
2148 Female, age 91, left hemisphere 7.4
Dentate gyrus
nTPM: 8.1
2530 Female, age 94, left hemisphere 9.3
2531 Female, age 67, both hemispheres 8.5
1927 Female, age 91, both hemispheres 8.2
2246 Female, age 85, both hemispheres 8.1
2010 Male, age 76, both hemispheres 7.6
2528 Male, age 74, both hemispheres 6.8
Entorhinal gyrus
nTPM: 8.0
2764 Male, age 80, right hemisphere 9.3
2117 Female, age 91, right hemisphere 8.8
2613 Female, age 94, left hemisphere 8.1
1787 Male, age 76, left hemisphere 7.5
1938 Female, age 85, left hemisphere 7.4
2686 Male, age 75, right hemisphere 7.0
Hippocampus, CA1
nTPM: 7.9
2749 Male, age 80, left hemisphere 9.2
2527 Male, age 74, both hemispheres 9.0
2082 Female, age 91, right hemisphere 7.9
1873 Female, age 85, both hemispheres 6.8
2045 Male, age 76, both hemispheres 6.4
Hippocampus, CA2
nTPM: 8.1
1963 Male, age 80, left hemisphere 8.9
2437 Female, age 94, left hemisphere 8.8
2249 Male, age 74, both hemispheres 8.2
1940 Female, age 85, left hemisphere 8.0
2113 Female, age 91, right hemisphere 7.4
1892 Male, age 76, both hemispheres 7.3
Hippocampus, CA3
nTPM: 7.6
2436 Male, age 74, both hemispheres 8.6
2137 Male, age 80, left hemisphere 8.3
1867 Male, age 76, both hemispheres 7.8
2620 Female, age 94, left hemisphere 7.5
1891 Female, age 85, both hemispheres 7.2
2861 Female, age 67, both hemispheres 5.9
Parahippocampal cortex
nTPM: 7.5
1990 Female, age 91, right hemisphere 8.4
2532 Female, age 72, left hemisphere 8.4
2245 Female, age 91, both hemispheres 7.8
2692 Male, age 74, both hemispheres 7.8
2018 Male, age 76, both hemispheres 7.5
2250 Female, age 67, right hemisphere 7.4
1850 Male, age 80, both hemispheres 7.2
2622 Female, age 67, right hemisphere 6.9
1933 Female, age 85, both hemispheres 6.6
2693 Female, age 94, both hemispheres 6.5
Perirhinal gyrus
nTPM: 8.1
1794 Male, age 80, right hemisphere 8.5
1847 Female, age 91, left hemisphere 8.5
1841 Female, age 85, right hemisphere 7.9
2521 Female, age 94, right hemisphere 7.9
2848 Male, age 76, right hemisphere 7.6
Subiculum
nTPM: 7.6
1977 Female, age 85, both hemispheres 8.9
2729 Female, age 91, right hemisphere 8.8
2619 Male, age 74, both hemispheres 8.1
1901 Male, age 80, both hemispheres 8.0
2042 Male, age 76, both hemispheres 6.4
2438 Female, age 94, left hemisphere 5.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.4
Samples: 197

Max nTPM: 40.6
Min nTPM: 2.3
Std nTPM: 5.9
Median nTPM: 14.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 40.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 34.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 32.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 32.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 29.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 28.0
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 27.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 27.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 26.7
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 25.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 25.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.9
FF:10169-103B7 60 years, female 9.4
FF:10153-102I9 76 years, female 6.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.7
Samples: 4

Max nTPM: 41.0
Min nTPM: 18.6
Sample A Female 41.0
Sample B Female 28.1
Sample C Male 27.1
Sample D Male 18.6
Entorhinal cortex
nTPM: 22.2
Samples: 4

Max nTPM: 28.4
Min nTPM: 15.1
Sample A Female 22.2
Sample B Female 22.9
Sample C Male 28.4
Sample D Male 15.1
Subiculum
nTPM: 21.8
Samples: 4

Max nTPM: 28.6
Min nTPM: 18.9
Sample A Female 28.6
Sample B Female 20.4
Sample C Male 19.4
Sample D Male 18.9
Ventral hippocampus
nTPM: 25.6
Samples: 4

Max nTPM: 29.8
Min nTPM: 18.6
Sample A Female 26.4
Sample B Female 18.6
Sample C Male 29.8
Sample D Male 27.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 11.3
Min nTPM: 9.1
Sample A Male 9.1
Sample B Male 11.3
Sample C Female 10.9
Sample D Female 9.1
Hippocampal formation
nTPM: 10.6
Samples: 4

Max nTPM: 11.8
Min nTPM: 8.7
Sample A Male 11.8
Sample B Male 11.3
Sample C Female 8.7
Sample D Female 10.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70723650 Antisense, RP_050705_01_E09, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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