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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:15.9 nTPM
HPA:15.9 nTPM
GTEx:124.4 nTPM
FANTOM5:136.1 Scaled Tags Per Million
Mouse:173.5 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005944Antibody CAB004349Antibody CAB013087Antibody CAB016059
Glial cells HighMediumMediumHigh
Neuronal cells HighMediumHighHigh









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.9
Sample id Sample description nTPM
Hippocampus
nTPM: 14.8
1911 Female, age 85, right hemisphere 15.7
1898 Male, age 80, left hemisphere 15.4
1855 Male, age 76, left hemisphere 14.7
2529 Female, age 94, left hemisphere 14.7
2621 Female, age 67, right hemisphere 14.4
2148 Female, age 91, left hemisphere 13.9
Dentate gyrus
nTPM: 14.9
2530 Female, age 94, left hemisphere 17.2
2246 Female, age 85, both hemispheres 14.9
1927 Female, age 91, both hemispheres 14.8
2531 Female, age 67, both hemispheres 14.7
2010 Male, age 76, both hemispheres 14.6
2528 Male, age 74, both hemispheres 13.3
Entorhinal gyrus
nTPM: 14.8
1938 Female, age 85, left hemisphere 15.9
1787 Male, age 76, left hemisphere 15.6
2117 Female, age 91, right hemisphere 14.9
2764 Male, age 80, right hemisphere 14.8
2686 Male, age 75, right hemisphere 14.7
2613 Female, age 94, left hemisphere 13.0
Hippocampus, CA1
nTPM: 15.2
2527 Male, age 74, both hemispheres 15.9
1873 Female, age 85, both hemispheres 15.8
2045 Male, age 76, both hemispheres 15.5
2749 Male, age 80, left hemisphere 14.8
2082 Female, age 91, right hemisphere 13.9
Hippocampus, CA2
nTPM: 14.6
1892 Male, age 76, both hemispheres 15.2
2249 Male, age 74, both hemispheres 15.0
1940 Female, age 85, left hemisphere 14.5
2437 Female, age 94, left hemisphere 14.5
1963 Male, age 80, left hemisphere 14.4
2113 Female, age 91, right hemisphere 14.0
Hippocampus, CA3
nTPM: 14.7
2436 Male, age 74, both hemispheres 16.0
1891 Female, age 85, both hemispheres 14.9
1867 Male, age 76, both hemispheres 14.7
2137 Male, age 80, left hemisphere 14.2
2861 Female, age 67, both hemispheres 14.2
2620 Female, age 94, left hemisphere 14.0
Parahippocampal cortex
nTPM: 15.2
2250 Female, age 67, right hemisphere 16.0
2018 Male, age 76, both hemispheres 15.9
2693 Female, age 94, both hemispheres 15.7
1850 Male, age 80, both hemispheres 15.6
1933 Female, age 85, both hemispheres 15.1
2532 Female, age 72, left hemisphere 15.0
1990 Female, age 91, right hemisphere 14.8
2622 Female, age 67, right hemisphere 14.8
2245 Female, age 91, both hemispheres 14.7
2692 Male, age 74, both hemispheres 14.7
Perirhinal gyrus
nTPM: 15.9
1847 Female, age 91, left hemisphere 17.1
2848 Male, age 76, right hemisphere 16.2
1794 Male, age 80, right hemisphere 15.9
1841 Female, age 85, right hemisphere 15.8
2521 Female, age 94, right hemisphere 14.7
Subiculum
nTPM: 15.4
2438 Female, age 94, left hemisphere 17.2
2619 Male, age 74, both hemispheres 16.0
1901 Male, age 80, both hemispheres 15.7
1977 Female, age 85, both hemispheres 15.3
2042 Male, age 76, both hemispheres 14.7
2729 Female, age 91, right hemisphere 13.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 124.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 124.4
Samples: 197

Max nTPM: 211.8
Min nTPM: 78.1
Std nTPM: 19.1
Median nTPM: 120.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 211.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 174.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 172.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 168.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 168.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 163.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 163.2
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 162.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 162.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 161.4
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 159.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 136.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 136.1
FF:10153-102I9 76 years, female 137.3
FF:10169-103B7 60 years, female 134.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 173.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 160.8
Samples: 4

Max nTPM: 176.4
Min nTPM: 149.0
Sample A Male 149.0
Sample B Male 160.6
Sample C Female 176.4
Sample D Female 157.1
Hippocampal formation
nTPM: 173.5
Samples: 4

Max nTPM: 187.8
Min nTPM: 156.8
Sample A Male 177.0
Sample B Male 156.8
Sample C Female 187.8
Sample D Female 172.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
68076534 Antisense, RP_040923_02_E05, Mouse strain C57BL/6J (56 days, male) 7.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.