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AIF1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:25.0 nTPM
HPA:25.0 nTPM
GTEx:34.5 nTPM
FANTOM5:58.2 Scaled Tags Per Million
Pig:18.6 nTPM
Mouse:16.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049234
Glial cells Medium
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.0
Sample id Sample description nTPM
Hippocampus
nTPM: 25.0
2621 Female, age 67, right hemisphere 29.3
1898 Male, age 80, left hemisphere 27.5
1855 Male, age 76, left hemisphere 24.7
1911 Female, age 85, right hemisphere 23.9
2148 Female, age 91, left hemisphere 22.8
2529 Female, age 94, left hemisphere 21.9
Dentate gyrus
nTPM: 22.8
2010 Male, age 76, both hemispheres 24.0
2531 Female, age 67, both hemispheres 23.6
1927 Female, age 91, both hemispheres 22.9
2246 Female, age 85, both hemispheres 22.6
2528 Male, age 74, both hemispheres 22.3
2530 Female, age 94, left hemisphere 21.7
Entorhinal gyrus
nTPM: 22.6
2117 Female, age 91, right hemisphere 24.1
1787 Male, age 76, left hemisphere 24.0
1938 Female, age 85, left hemisphere 22.4
2764 Male, age 80, right hemisphere 22.1
2613 Female, age 94, left hemisphere 21.6
2686 Male, age 75, right hemisphere 21.3
Hippocampus, CA1
nTPM: 23.2
2045 Male, age 76, both hemispheres 24.3
2082 Female, age 91, right hemisphere 23.8
1873 Female, age 85, both hemispheres 23.1
2527 Male, age 74, both hemispheres 22.8
2749 Male, age 80, left hemisphere 22.0
Hippocampus, CA2
nTPM: 24.2
2437 Female, age 94, left hemisphere 26.4
1940 Female, age 85, left hemisphere 26.0
1892 Male, age 76, both hemispheres 24.1
2113 Female, age 91, right hemisphere 23.1
2249 Male, age 74, both hemispheres 22.7
1963 Male, age 80, left hemisphere 22.6
Hippocampus, CA3
nTPM: 22.6
1867 Male, age 76, both hemispheres 24.3
2436 Male, age 74, both hemispheres 23.4
1891 Female, age 85, both hemispheres 23.3
2137 Male, age 80, left hemisphere 21.9
2620 Female, age 94, left hemisphere 21.6
2861 Female, age 67, both hemispheres 21.2
Parahippocampal cortex
nTPM: 23.1
2250 Female, age 67, right hemisphere 31.8
2018 Male, age 76, both hemispheres 26.5
1850 Male, age 80, both hemispheres 22.8
2245 Female, age 91, both hemispheres 22.1
1990 Female, age 91, right hemisphere 22.0
2532 Female, age 72, left hemisphere 21.8
2693 Female, age 94, both hemispheres 21.8
1933 Female, age 85, both hemispheres 21.6
2622 Female, age 67, right hemisphere 20.4
2692 Male, age 74, both hemispheres 19.9
Perirhinal gyrus
nTPM: 22.6
1847 Female, age 91, left hemisphere 23.2
1841 Female, age 85, right hemisphere 22.8
2848 Male, age 76, right hemisphere 22.8
1794 Male, age 80, right hemisphere 22.4
2521 Female, age 94, right hemisphere 22.1
Subiculum
nTPM: 22.9
2042 Male, age 76, both hemispheres 25.2
1901 Male, age 80, both hemispheres 23.3
2729 Female, age 91, right hemisphere 23.3
2619 Male, age 74, both hemispheres 22.6
2438 Female, age 94, left hemisphere 21.8
1977 Female, age 85, both hemispheres 21.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.5
Samples: 197

Max nTPM: 224.4
Min nTPM: 3.0
Std nTPM: 31.0
Median nTPM: 26.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 224.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 176.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 165.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 159.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 124.4
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 121.5
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 96.8
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 92.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 89.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 84.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 82.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.2
FF:10153-102I9 76 years, female 67.3
FF:10169-103B7 60 years, female 49.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 22.7
Min nTPM: 13.9
Sample A Female 22.7
Sample B Female 16.1
Sample C Male 21.7
Sample D Male 13.9
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 24.5
Min nTPM: 12.3
Sample A Female 18.7
Sample B Female 24.5
Sample C Male 17.5
Sample D Male 12.3
Subiculum
nTPM: 16.7
Samples: 4

Max nTPM: 20.9
Min nTPM: 12.4
Sample A Female 20.9
Sample B Female 17.6
Sample C Male 12.4
Sample D Male 15.8
Ventral hippocampus
nTPM: 15.6
Samples: 4

Max nTPM: 18.1
Min nTPM: 12.9
Sample A Female 15.3
Sample B Female 15.9
Sample C Male 12.9
Sample D Male 18.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 18.3
Min nTPM: 14.8
Sample A Male 18.3
Sample B Male 17.4
Sample C Female 15.7
Sample D Female 14.8
Hippocampal formation
nTPM: 13.4
Samples: 4

Max nTPM: 16.4
Min nTPM: 10.9
Sample A Male 16.4
Sample B Male 14.0
Sample C Female 10.9
Sample D Female 12.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
75080249 Antisense, RP_060412_06_H07, Mouse strain C57BL/6J (56 days, male) 0.1
72081677 Antisense, RP_051012_04_H10, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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