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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:9.2 nTPM
HPA:9.2 nTPM
GTEx:11.8 nTPM
FANTOM5:10.4 Scaled Tags Per Million

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043800Antibody HPA053762
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.2
Sample id Sample description nTPM
Hippocampus
nTPM: 6.1
2148 Female, age 91, left hemisphere 13.0
1911 Female, age 85, right hemisphere 7.3
1855 Male, age 76, left hemisphere 5.5
2621 Female, age 67, right hemisphere 5.0
2529 Female, age 94, left hemisphere 3.1
1898 Male, age 80, left hemisphere 2.3
Dentate gyrus
nTPM: 8.1
2531 Female, age 67, both hemispheres 14.6
1927 Female, age 91, both hemispheres 9.3
2246 Female, age 85, both hemispheres 8.6
2528 Male, age 74, both hemispheres 7.9
2010 Male, age 76, both hemispheres 5.2
2530 Female, age 94, left hemisphere 3.1
Entorhinal gyrus
nTPM: 5.8
2613 Female, age 94, left hemisphere 10.5
2686 Male, age 75, right hemisphere 10.0
2764 Male, age 80, right hemisphere 7.2
1938 Female, age 85, left hemisphere 3.7
1787 Male, age 76, left hemisphere 3.1
2117 Female, age 91, right hemisphere 0.5
Hippocampus, CA1
nTPM: 8.2
2045 Male, age 76, both hemispheres 13.0
2082 Female, age 91, right hemisphere 8.7
1873 Female, age 85, both hemispheres 8.5
2527 Male, age 74, both hemispheres 5.7
2749 Male, age 80, left hemisphere 5.0
Hippocampus, CA2
nTPM: 4.7
2113 Female, age 91, right hemisphere 8.1
1940 Female, age 85, left hemisphere 6.3
2437 Female, age 94, left hemisphere 4.5
1892 Male, age 76, both hemispheres 3.3
1963 Male, age 80, left hemisphere 3.0
2249 Male, age 74, both hemispheres 2.9
Hippocampus, CA3
nTPM: 9.2
2620 Female, age 94, left hemisphere 17.5
2861 Female, age 67, both hemispheres 13.8
2137 Male, age 80, left hemisphere 9.8
1891 Female, age 85, both hemispheres 5.7
1867 Male, age 76, both hemispheres 4.5
2436 Male, age 74, both hemispheres 4.2
Parahippocampal cortex
nTPM: 7.1
2693 Female, age 94, both hemispheres 11.9
2622 Female, age 67, right hemisphere 10.9
2692 Male, age 74, both hemispheres 10.2
2018 Male, age 76, both hemispheres 6.5
2532 Female, age 72, left hemisphere 6.5
1990 Female, age 91, right hemisphere 6.1
1933 Female, age 85, both hemispheres 5.3
2245 Female, age 91, both hemispheres 5.0
1850 Male, age 80, both hemispheres 4.3
2250 Female, age 67, right hemisphere 3.9
Perirhinal gyrus
nTPM: 4.8
2848 Male, age 76, right hemisphere 5.9
2521 Female, age 94, right hemisphere 5.6
1841 Female, age 85, right hemisphere 5.1
1847 Female, age 91, left hemisphere 4.0
1794 Male, age 80, right hemisphere 3.6
Subiculum
nTPM: 5.4
2729 Female, age 91, right hemisphere 9.1
2619 Male, age 74, both hemispheres 6.4
1901 Male, age 80, both hemispheres 6.0
1977 Female, age 85, both hemispheres 4.4
2042 Male, age 76, both hemispheres 4.4
2438 Female, age 94, left hemisphere 2.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 197

Max nTPM: 23.3
Min nTPM: 5.4
Std nTPM: 3.6
Median nTPM: 11.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 23.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 22.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 21.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 20.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 20.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 19.8
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 19.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 19.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 19.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 19.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 19.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.4
FF:10169-103B7 60 years, female 12.5
FF:10153-102I9 76 years, female 8.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.