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MRPS18B
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:45.2 nTPM
HPA:45.2 nTPM
GTEx:31.1 nTPM
FANTOM5:62.3 Scaled Tags Per Million
Pig:20.2 nTPM
Mouse:34.9 nTPM
Allen mouse:0.7 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 45.2
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 42.6
2019 Male, age 18, unknown 44.5
2666 Male, age 74, left hemisphere 43.7
2411 Female, age 72, unknown 43.6
1870 Female, age 42, unknown 43.5
2828 Female, age 72, unknown 43.3
1830 Male, age 51, unknown 42.7
1827 Male, age 72, unknown 42.6
1833 Male, age 53, unknown 42.6
2586 Male, age 75, left hemisphere 42.6
2219 Male, age 76, both hemispheres 37.4
Dorsal raphe nucleus
nTPM: 41.4
2750 Male, age 76, both hemispheres 43.8
2016 Female, age 72, unknown 41.2
1828 Male, age 53, unknown 41.0
2298 Female, age 72, unknown 40.7
2047 Male, age 72, unknown 40.2
Inferior colliculus
nTPM: 41.6
1890 Male, age 53, unknown 42.0
2097 Female, age 72, unknown 42.0
1848 Female, age 42, unknown 41.6
2849 Male, age 72, unknown 40.8
Median raphe nucleus
nTPM: 38.7
2220 Male, age 76, midline 38.7
Pedunculopontine tegmental nucleus
nTPM: 42.2
2334 Male, age 80, both hemispheres 43.2
2338 Male, age 61, both hemispheres 42.2
1921 Female, age 85, both hemispheres 41.1
Periaquaductal grey, anterior
nTPM: 41.4
2502 Female, age 75, unknown 43.0
1947 Male, age 18, unknown 41.0
1795 Male, age 51, unknown 40.3
Periaquaductal grey, dorsal
nTPM: 39.5
2464 Female, age 72, unknown 40.9
1831 Male, age 72, unknown 40.0
1840 Male, age 53, unknown 38.8
2850 Male, age 76, both hemispheres 38.4
Periaquaductal grey, lateral
nTPM: 40.4
2272 Male, age 74, both hemispheres 42.8
2053 Male, age 18, unknown 40.5
2140 Male, age 76, both hemispheres 38.0
Pretectal area
nTPM: 42.3
1817 Female, age 42, unknown 44.9
2007 Male, age 72, unknown 43.7
2667 Female, age 75, unknown 43.7
1816 Male, age 51, unknown 43.2
1815 Male, age 53, unknown 43.1
1944 Female, age 72, unknown 42.9
2316 Male, age 76, right hemisphere 42.8
2273 Male, age 74, both hemispheres 42.6
2224 Female, age 72, unknown 40.0
2825 Male, age 18, unknown 39.9
2407 Male, age 75, both hemispheres 39.0
Red nucleus
nTPM: 45.2
1821 Female, age 72, unknown 47.3
2823 Male, age 76, right hemisphere 46.5
1904 Male, age 53, unknown 46.4
1954 Female, age 42, unknown 46.4
1865 Male, age 51, unknown 46.1
2503 Female, age 72, unknown 46.0
2227 Male, age 72, unknown 45.7
2725 Female, age 75, unknown 44.8
2769 Male, age 72, unknown 44.3
2785 Male, age 18, unknown 43.9
2588 Male, age 74, left hemisphere 42.5
2584 Male, age 75, left hemisphere 42.4
Substantia nigra
nTPM: 41.1
1889 Female, age 72, unknown 42.8
2699 Male, age 18, unknown 42.2
1851 Male, age 51, unknown 41.9
1916 Female, age 42, unknown 40.9
1941 Male, age 53, unknown 40.9
2590 Female, age 75, unknown 40.8
2665 Male, age 74, both hemispheres 40.8
2409 Female, age 72, unknown 40.6
2583 Male, age 75, right hemisphere 40.4
2241 Male, age 72, unknown 39.5
Superior colliculus
nTPM: 42.3
1913 Female, age 42, unknown 45.3
1995 Male, age 72, unknown 44.3
2261 Male, age 18, unknown 43.0
2587 Male, age 74, left hemisphere 42.8
2087 Female, age 72, unknown 42.4
1839 Male, age 51, unknown 42.1
1895 Male, age 76, right hemisphere 42.1
1796 Male, age 53, unknown 42.0
2668 Female, age 75, unknown 39.9
2664 Male, age 75, both hemispheres 38.9
Ventral tegmental area
nTPM: 42.3
2410 Female, age 72, unknown 46.0
2223 Female, age 72, unknown 42.7
1915 Female, age 42, unknown 41.5
2021 Male, age 53, unknown 41.4
2218 Male, age 76, both hemispheres 41.2
1942 Male, age 51, unknown 40.7

MIDBRAIN - GTEx RNA-seqi
Average nTPM 31.1
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 31.1
Samples: 139

Max nTPM: 55.7
Min nTPM: 5.4
Std nTPM: 7.4
Median nTPM: 31.2
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 55.7
GTEX-N7MT-0011-R2a-SM-2I3GI 60-69 years, female 47.7
GTEX-1H3O1-0011-R2b-SM-CKZOT 60-69 years, male 46.6
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 45.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 45.1
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 44.3
GTEX-1GTWX-0011-R2b-SM-ADEH5 60-69 years, male 44.1
GTEX-1IY9M-0011-R2a-SM-D4P29 60-69 years, male 43.5
GTEX-ZAB4-0011-R2a-SM-4RGNP 40-49 years, male 43.2
GTEX-1I1GS-0011-R2b-SM-CMKHG 60-69 years, male 43.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ 60-69 years, male 42.9
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 62.3
FF:10158-103A5 76 years, female 62.3

MIDBRAIN - Pig RNA-seqi
Average nTPM 20.2
Pig sample Sample description nTPM
Midbrain
nTPM: 20.2
Samples: 4

Max nTPM: 31.6
Min nTPM: 13.3
Sample A Female 31.6
Sample B Female 18.6
Sample C Male 17.2
Sample D Male 13.3
Periaqueductal gray
nTPM: 14.5
Samples: 3

Max nTPM: 15.6
Min nTPM: 12.6
Sample B Female 15.6
Sample C Male 15.4
Sample D Male 12.6
Substantia nigra
nTPM: 17.0
Samples: 4

Max nTPM: 23.0
Min nTPM: 13.8
Sample A Female 23.0
Sample B Female 13.8
Sample C Male 14.4
Sample D Male 16.9
Superior colliculi
nTPM: 19.9
Samples: 4

Max nTPM: 27.3
Min nTPM: 16.5
Sample A Female 27.3
Sample B Female 16.5
Sample C Male 18.7
Sample D Male 17.2

MIDBRAIN - Mouse RNA-seqi
Average nTPM 34.9
Mouse sample Sample description nTPM
Midbrain
nTPM: 35.0
Samples: 4

Max nTPM: 39.3
Min nTPM: 32.6
Sample A Male 39.3
Sample B Male 34.6
Sample C Female 32.6
Sample D Female 33.3

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.7
68410428 Antisense, RP_041214_01_H03, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.