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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:17.5 nTPM
HPA:17.5 nTPM
GTEx:104.9 nTPM
FANTOM5:144.7 Scaled Tags Per Million
Pig:71.7 nTPM
Mouse:60.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody CAB010162Antibody CAB025656
Glial cells LowLow
Neuronal cells Not detectedMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.5
Sample id Sample description nTPM
Hippocampus
nTPM: 14.1
2529 Female, age 94, left hemisphere 21.4
1855 Male, age 76, left hemisphere 15.2
1898 Male, age 80, left hemisphere 14.7
1911 Female, age 85, right hemisphere 12.0
2621 Female, age 67, right hemisphere 10.9
2148 Female, age 91, left hemisphere 10.3
Dentate gyrus
nTPM: 12.3
2528 Male, age 74, both hemispheres 27.5
2530 Female, age 94, left hemisphere 23.3
2010 Male, age 76, both hemispheres 10.6
2246 Female, age 85, both hemispheres 8.4
2531 Female, age 67, both hemispheres 4.1
1927 Female, age 91, both hemispheres 0.0
Entorhinal gyrus
nTPM: 12.4
2117 Female, age 91, right hemisphere 31.1
2686 Male, age 75, right hemisphere 13.2
2764 Male, age 80, right hemisphere 10.6
2613 Female, age 94, left hemisphere 9.7
1787 Male, age 76, left hemisphere 7.4
1938 Female, age 85, left hemisphere 2.5
Hippocampus, CA1
nTPM: 8.7
2527 Male, age 74, both hemispheres 20.1
2082 Female, age 91, right hemisphere 11.0
1873 Female, age 85, both hemispheres 10.0
2045 Male, age 76, both hemispheres 2.6
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 11.8
2249 Male, age 74, both hemispheres 32.7
2113 Female, age 91, right hemisphere 12.0
2437 Female, age 94, left hemisphere 10.9
1940 Female, age 85, left hemisphere 10.8
1963 Male, age 80, left hemisphere 4.7
1892 Male, age 76, both hemispheres 0.0
Hippocampus, CA3
nTPM: 11.5
2436 Male, age 74, both hemispheres 22.8
2861 Female, age 67, both hemispheres 15.3
1891 Female, age 85, both hemispheres 14.0
2620 Female, age 94, left hemisphere 12.7
1867 Male, age 76, both hemispheres 4.4
2137 Male, age 80, left hemisphere 0.0
Parahippocampal cortex
nTPM: 5.7
2692 Male, age 74, both hemispheres 20.3
2622 Female, age 67, right hemisphere 8.3
2250 Female, age 67, right hemisphere 6.2
2018 Male, age 76, both hemispheres 5.1
1990 Female, age 91, right hemisphere 5.0
2245 Female, age 91, both hemispheres 4.7
2532 Female, age 72, left hemisphere 3.2
1850 Male, age 80, both hemispheres 2.4
2693 Female, age 94, both hemispheres 1.2
1933 Female, age 85, both hemispheres 0.5
Perirhinal gyrus
nTPM: 0.5
1794 Male, age 80, right hemisphere 1.3
2848 Male, age 76, right hemisphere 1.3
1841 Female, age 85, right hemisphere 0.0
1847 Female, age 91, left hemisphere 0.0
2521 Female, age 94, right hemisphere 0.0
Subiculum
nTPM: 17.5
2042 Male, age 76, both hemispheres 33.6
2619 Male, age 74, both hemispheres 23.4
1901 Male, age 80, both hemispheres 16.8
2729 Female, age 91, right hemisphere 14.6
2438 Female, age 94, left hemisphere 9.4
1977 Female, age 85, both hemispheres 7.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 104.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 104.9
Samples: 197

Max nTPM: 267.5
Min nTPM: 39.4
Std nTPM: 36.9
Median nTPM: 101.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 267.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 205.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 204.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 193.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 187.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 187.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 186.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 182.3
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 177.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 175.0
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 164.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 144.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 144.7
FF:10153-102I9 76 years, female 176.4
FF:10169-103B7 60 years, female 113.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 71.7
Samples: 4

Max nTPM: 81.4
Min nTPM: 57.6
Sample A Female 81.4
Sample B Female 69.6
Sample C Male 78.2
Sample D Male 57.6
Entorhinal cortex
nTPM: 42.6
Samples: 4

Max nTPM: 47.8
Min nTPM: 33.0
Sample A Female 47.1
Sample B Female 42.3
Sample C Male 47.8
Sample D Male 33.0
Subiculum
nTPM: 59.2
Samples: 4

Max nTPM: 67.9
Min nTPM: 47.0
Sample A Female 67.9
Sample B Female 61.4
Sample C Male 60.4
Sample D Male 47.0
Ventral hippocampus
nTPM: 70.4
Samples: 4

Max nTPM: 96.6
Min nTPM: 53.0
Sample A Female 64.5
Sample B Female 53.0
Sample C Male 96.6
Sample D Male 67.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.7
Samples: 4

Max nTPM: 45.9
Min nTPM: 28.6
Sample A Male 45.9
Sample B Male 36.1
Sample C Female 36.3
Sample D Female 28.6
Hippocampal formation
nTPM: 60.7
Samples: 4

Max nTPM: 79.7
Min nTPM: 39.6
Sample A Male 39.6
Sample B Male 53.5
Sample C Female 79.7
Sample D Female 69.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.