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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:457.2 nTPM
HPA:457.2 nTPM
GTEx:252.8 nTPM
FANTOM5:510.0 Scaled Tags Per Million
Pig:125.4 nTPM
Mouse:261.0 nTPM
Allen mouse:6.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB004288
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 457.2
Sample id Sample description nTPM
Hippocampus
nTPM: 455.5
1898 Male, age 80, left hemisphere 461.9
2621 Female, age 67, right hemisphere 461.0
2529 Female, age 94, left hemisphere 460.4
2148 Female, age 91, left hemisphere 453.6
1911 Female, age 85, right hemisphere 451.0
1855 Male, age 76, left hemisphere 445.0
Dentate gyrus
nTPM: 457.2
2530 Female, age 94, left hemisphere 473.6
2528 Male, age 74, both hemispheres 461.1
2531 Female, age 67, both hemispheres 460.5
2010 Male, age 76, both hemispheres 457.8
2246 Female, age 85, both hemispheres 449.9
1927 Female, age 91, both hemispheres 440.6
Entorhinal gyrus
nTPM: 448.1
2117 Female, age 91, right hemisphere 463.1
2686 Male, age 75, right hemisphere 460.1
2764 Male, age 80, right hemisphere 453.6
1787 Male, age 76, left hemisphere 445.9
2613 Female, age 94, left hemisphere 434.2
1938 Female, age 85, left hemisphere 431.6
Hippocampus, CA1
nTPM: 449.4
2045 Male, age 76, both hemispheres 453.6
2082 Female, age 91, right hemisphere 451.6
2527 Male, age 74, both hemispheres 448.4
2749 Male, age 80, left hemisphere 448.1
1873 Female, age 85, both hemispheres 445.1
Hippocampus, CA2
nTPM: 450.9
1963 Male, age 80, left hemisphere 462.6
2437 Female, age 94, left hemisphere 453.7
2249 Male, age 74, both hemispheres 448.9
1940 Female, age 85, left hemisphere 448.0
1892 Male, age 76, both hemispheres 446.8
2113 Female, age 91, right hemisphere 445.6
Hippocampus, CA3
nTPM: 449.2
2861 Female, age 67, both hemispheres 461.5
2436 Male, age 74, both hemispheres 456.5
1867 Male, age 76, both hemispheres 455.8
1891 Female, age 85, both hemispheres 448.8
2137 Male, age 80, left hemisphere 436.3
2620 Female, age 94, left hemisphere 436.2
Parahippocampal cortex
nTPM: 443.7
2018 Male, age 76, both hemispheres 465.6
2532 Female, age 72, left hemisphere 447.3
2245 Female, age 91, both hemispheres 446.5
2250 Female, age 67, right hemisphere 446.5
1850 Male, age 80, both hemispheres 444.5
1990 Female, age 91, right hemisphere 443.6
2622 Female, age 67, right hemisphere 440.5
2692 Male, age 74, both hemispheres 440.5
1933 Female, age 85, both hemispheres 438.5
2693 Female, age 94, both hemispheres 423.7
Perirhinal gyrus
nTPM: 444.1
2521 Female, age 94, right hemisphere 449.7
1794 Male, age 80, right hemisphere 446.4
1847 Female, age 91, left hemisphere 443.2
1841 Female, age 85, right hemisphere 442.0
2848 Male, age 76, right hemisphere 439.1
Subiculum
nTPM: 448.7
2042 Male, age 76, both hemispheres 463.6
1977 Female, age 85, both hemispheres 450.5
2619 Male, age 74, both hemispheres 447.0
2438 Female, age 94, left hemisphere 444.4
2729 Female, age 91, right hemisphere 443.8
1901 Male, age 80, both hemispheres 443.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 252.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 252.8
Samples: 197

Max nTPM: 461.2
Min nTPM: 143.9
Std nTPM: 57.2
Median nTPM: 240.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 461.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 456.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 443.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 440.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 431.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 373.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 372.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 372.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 371.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 367.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 360.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 510.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 510.0
FF:10153-102I9 76 years, female 519.8
FF:10169-103B7 60 years, female 500.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 125.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 125.4
Samples: 4

Max nTPM: 149.7
Min nTPM: 99.0
Sample A Female 149.7
Sample B Female 118.8
Sample C Male 134.2
Sample D Male 99.0
Entorhinal cortex
nTPM: 107.1
Samples: 4

Max nTPM: 124.8
Min nTPM: 83.7
Sample A Female 105.5
Sample B Female 124.8
Sample C Male 114.4
Sample D Male 83.7
Subiculum
nTPM: 120.3
Samples: 4

Max nTPM: 155.6
Min nTPM: 101.6
Sample A Female 155.6
Sample B Female 114.9
Sample C Male 109.1
Sample D Male 101.6
Ventral hippocampus
nTPM: 120.3
Samples: 4

Max nTPM: 155.7
Min nTPM: 99.2
Sample A Female 114.8
Sample B Female 99.2
Sample C Male 155.7
Sample D Male 111.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 261.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 255.0
Samples: 4

Max nTPM: 265.5
Min nTPM: 239.5
Sample A Male 257.4
Sample B Male 257.5
Sample C Female 265.5
Sample D Female 239.5
Hippocampal formation
nTPM: 261.0
Samples: 4

Max nTPM: 285.1
Min nTPM: 236.0
Sample A Male 285.1
Sample B Male 247.3
Sample C Female 236.0
Sample D Female 275.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.3
71021172 Antisense, RP_050531_01_G07, Mouse strain C57BL/6J (56 days, male) 6.3

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The Human Protein Atlas

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