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DENND6B
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.3 nTPM
HPA:10.3 nTPM
GTEx:10.5 nTPM
FANTOM5:26.4 Scaled Tags Per Million
Pig:17.8 nTPM
Mouse:5.1 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018934Antibody HPA021653Antibody HPA029570
Glial cells LowLowNot detected
Neuronal cells MediumMediumNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.3
Sample id Sample description nTPM
Hippocampus
nTPM: 9.0
2148 Female, age 91, left hemisphere 11.9
1855 Male, age 76, left hemisphere 9.1
2621 Female, age 67, right hemisphere 8.9
1898 Male, age 80, left hemisphere 8.8
1911 Female, age 85, right hemisphere 8.1
2529 Female, age 94, left hemisphere 7.3
Dentate gyrus
nTPM: 9.9
2531 Female, age 67, both hemispheres 11.7
1927 Female, age 91, both hemispheres 10.6
2530 Female, age 94, left hemisphere 10.4
2528 Male, age 74, both hemispheres 9.3
2246 Female, age 85, both hemispheres 8.8
2010 Male, age 76, both hemispheres 8.5
Entorhinal gyrus
nTPM: 10.3
2613 Female, age 94, left hemisphere 13.1
2764 Male, age 80, right hemisphere 10.7
2686 Male, age 75, right hemisphere 10.6
1938 Female, age 85, left hemisphere 10.1
1787 Male, age 76, left hemisphere 9.9
2117 Female, age 91, right hemisphere 7.4
Hippocampus, CA1
nTPM: 9.7
2082 Female, age 91, right hemisphere 12.4
2749 Male, age 80, left hemisphere 9.9
2045 Male, age 76, both hemispheres 9.6
2527 Male, age 74, both hemispheres 8.4
1873 Female, age 85, both hemispheres 8.1
Hippocampus, CA2
nTPM: 9.6
2437 Female, age 94, left hemisphere 10.4
1892 Male, age 76, both hemispheres 10.3
2113 Female, age 91, right hemisphere 10.2
1963 Male, age 80, left hemisphere 9.5
2249 Male, age 74, both hemispheres 8.9
1940 Female, age 85, left hemisphere 8.5
Hippocampus, CA3
nTPM: 10.2
2620 Female, age 94, left hemisphere 14.3
2861 Female, age 67, both hemispheres 13.9
2137 Male, age 80, left hemisphere 9.7
1867 Male, age 76, both hemispheres 8.6
2436 Male, age 74, both hemispheres 7.8
1891 Female, age 85, both hemispheres 7.1
Parahippocampal cortex
nTPM: 9.8
2622 Female, age 67, right hemisphere 12.4
2693 Female, age 94, both hemispheres 11.0
2245 Female, age 91, both hemispheres 9.9
1850 Male, age 80, both hemispheres 9.7
1990 Female, age 91, right hemisphere 9.7
1933 Female, age 85, both hemispheres 9.5
2250 Female, age 67, right hemisphere 9.4
2532 Female, age 72, left hemisphere 9.0
2018 Male, age 76, both hemispheres 8.7
2692 Male, age 74, both hemispheres 8.6
Perirhinal gyrus
nTPM: 10.3
2848 Male, age 76, right hemisphere 11.2
1847 Female, age 91, left hemisphere 11.1
1794 Male, age 80, right hemisphere 10.8
2521 Female, age 94, right hemisphere 9.6
1841 Female, age 85, right hemisphere 9.0
Subiculum
nTPM: 8.3
2729 Female, age 91, right hemisphere 10.4
2619 Male, age 74, both hemispheres 9.3
1977 Female, age 85, both hemispheres 8.9
1901 Male, age 80, both hemispheres 7.5
2438 Female, age 94, left hemisphere 7.4
2042 Male, age 76, both hemispheres 6.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.5
Samples: 197

Max nTPM: 21.8
Min nTPM: 1.5
Std nTPM: 3.7
Median nTPM: 10.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 21.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 21.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 19.9
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 19.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 18.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 17.9
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 17.7
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 17.1
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 16.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 16.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 16.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.4
FF:10169-103B7 60 years, female 29.2
FF:10153-102I9 76 years, female 23.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 19.7
Min nTPM: 13.9
Sample A Female 19.7
Sample B Female 17.1
Sample C Male 16.8
Sample D Male 13.9
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 17.3
Min nTPM: 15.3
Sample A Female 17.0
Sample B Female 15.3
Sample C Male 17.3
Sample D Male 15.7
Subiculum
nTPM: 16.6
Samples: 4

Max nTPM: 19.6
Min nTPM: 15.4
Sample A Female 19.6
Sample B Female 15.4
Sample C Male 15.8
Sample D Male 15.4
Ventral hippocampus
nTPM: 17.8
Samples: 4

Max nTPM: 21.7
Min nTPM: 13.3
Sample A Female 18.3
Sample B Female 13.3
Sample C Male 21.7
Sample D Male 17.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 6.2
Min nTPM: 4.0
Sample A Male 4.9
Sample B Male 6.2
Sample C Female 5.4
Sample D Female 4.0
Hippocampal formation
nTPM: 5.1
Samples: 4

Max nTPM: 6.2
Min nTPM: 3.4
Sample A Male 6.1
Sample B Male 4.6
Sample C Female 3.4
Sample D Female 6.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
69353669 Antisense, RP_050412_02_E04, Mouse strain C57BL/6J (56 days, male) 9.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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