ABOUTMENU
HELP
NEWS
PLPP6
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:4.0 nTPM
HPA:4.0 nTPM
GTEx:3.9 nTPM
FANTOM5:6.9 Scaled Tags Per Million
Pig:3.8 nTPM
Mouse:35.1 nTPM
Allen mouse:0.5 Expression energy

CAUDATE - Antibody stainingi
Antibody HPA018096
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 4.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 4.0
2289 Male, age 61, right hemisphere 6.4
1854 Male, age 80, left hemisphere 4.1
2846 Female, age 79, unknown 4.0
1781 Male, age 74, unknown 3.6
2290 Female, age 72, unknown 3.6
2481 Female, age 94, left hemisphere 3.6
1857 Female, age 85, left hemisphere 3.4
2288 Male, age 75, left hemisphere 3.0
Claustrum
nTPM: 2.7
2491 Male, age 75, both hemispheres 3.1
2568 Male, age 61, both hemispheres 3.1
2392 Female, age 94, both hemispheres 2.9
2284 Female, age 91, both hemispheres 2.7
2645 Female, age 72, unknown 2.7
2198 Male, age 80, both hemispheres 2.6
1956 Male, age 74, unknown 2.5
2196 Female, age 79, unknown 2.5
2292 Female, age 85, both hemispheres 2.5
Globus pallidus, externus
nTPM: 2.5
2646 Male, age 61, right hemisphere 3.3
2772 Female, age 79, unknown 2.6
1996 Male, age 80, right hemisphere 2.4
2395 Male, age 75, both hemispheres 2.4
2567 Female, age 72, unknown 1.9
Globus pallidus, internus
nTPM: 2.5
2483 Female, age 94, right hemisphere 3.9
2778 Female, age 91, both hemispheres 2.9
2287 Male, age 75, right hemisphere 2.7
1818 Male, age 74, unknown 2.4
2111 Female, age 85, right hemisphere 2.1
2566 Female, age 72, unknown 2.0
2037 Male, age 80, right hemisphere 1.8
Nucleus accumbens
nTPM: 3.6
2824 Male, age 61, right hemisphere 4.7
1856 Female, age 91, right hemisphere 4.1
1783 Male, age 74, unknown 3.5
2286 Male, age 75, left hemisphere 3.5
2391 Female, age 94, left hemisphere 3.5
2732 Male, age 80, right hemisphere 3.4
1806 Female, age 85, left hemisphere 3.3
2698 Female, age 72, unknown 3.2
Nucleus basalis of Meynert
nTPM: 3.1
2569 Male, age 61, both hemispheres 3.5
2393 Male, age 80, right hemisphere 3.3
2484 Female, age 94, left hemisphere 3.3
2821 Male, age 75, both hemispheres 2.5
Nucleus of the diagonal band
nTPM: 3.4
1979 Male, age 74, unknown 4.2
1812 Female, age 91, both hemispheres 3.4
2029 Male, age 61, right hemisphere 3.2
2195 Female, age 85, both hemispheres 3.2
2775 Male, age 80, right hemisphere 3.1
Olfactory tubercle
nTPM: 3.5
1846 Male, age 80, right hemisphere 3.7
2487 Female, age 94, left hemisphere 3.5
2856 Male, age 75, right hemisphere 3.5
1998 Female, age 91, both hemispheres 3.4
Putamen
nTPM: 3.6
1838 Male, age 80, right hemisphere 4.5
2466 Female, age 79, unknown 4.0
1937 Female, age 91, right hemisphere 3.6
1829 Male, age 74, unknown 3.5
2482 Female, age 94, left hemisphere 3.3
2647 Male, age 75, left hemisphere 3.1
2489 Female, age 72, unknown 2.8
Septal nuclei
nTPM: 3.6
2199 Male, age 80, right hemisphere 4.4
2031 Female, age 72, unknown 4.0
2394 Male, age 61, left hemisphere 3.8
2009 Female, age 91, both hemispheres 3.7
1960 Male, age 74, unknown 3.4
2629 Female, age 94, right hemisphere 3.4
2059 Female, age 85, both hemispheres 2.6

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 3.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 3.8
Samples: 246

Max nTPM: 9.7
Min nTPM: 0.7
Std nTPM: 1.0
Median nTPM: 3.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 9.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 6.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 6.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 6.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 6.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 6.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 6.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 5.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 5.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 5.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 5.7
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 3.7
Samples: 246

Max nTPM: 7.0
Min nTPM: 1.2
Std nTPM: 0.9
Median nTPM: 3.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 7.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 6.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 6.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 6.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 5.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 5.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 5.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 5.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 5.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 5.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 5.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 3.9
Samples: 205

Max nTPM: 7.3
Min nTPM: 1.7
Std nTPM: 1.0
Median nTPM: 3.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 7.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 7.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 6.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 6.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 6.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 6.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 5.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 5.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 5.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 5.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 5.8
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 2.6
FF:10164-103B2 76 years, female 2.6
Globus pallidus
Scaled Tags Per Million: 5.1
FF:10175-103C4 60 years, female 5.5
FF:10161-103A8 76 years, female 4.6
Nucleus accumbens
Scaled Tags Per Million: 5.5
FF:10037-101F1 23-56 years, mixed 5.5
Putamen
Scaled Tags Per Million: 6.9
FF:10176-103C5 60 years, female 6.9

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 3.8
Pig sample Sample description nTPM
Caudate
nTPM: 3.8
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.1
Sample A Female 3.4
Sample B Female 4.0
Sample C Male 4.5
Sample D Male 3.1
Putamen
nTPM: 2.9
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.3
Sample A Female 2.9
Sample B Female 2.3
Sample C Male 3.4
Sample D Male 2.8
Septum
nTPM: 3.8
Samples: 4

Max nTPM: 3.9
Min nTPM: 3.5
Sample A Female 3.9
Sample B Female 3.5
Sample C Male 3.9
Sample D Male 3.9
Ventral pallidum
nTPM: 3.3
Samples: 4

Max nTPM: 3.9
Min nTPM: 2.8
Sample A Female 2.8
Sample B Female 3.1
Sample C Male 3.9
Sample D Male 3.2

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 35.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 35.1
Samples: 4

Max nTPM: 38.7
Min nTPM: 29.4
Sample A Male 29.4
Sample B Male 34.1
Sample C Female 38.2
Sample D Female 38.7
Septum
nTPM: 27.6
Samples: 4

Max nTPM: 29.9
Min nTPM: 26.1
Sample A Male 26.6
Sample B Male 29.9
Sample C Female 27.9
Sample D Female 26.1
Ventral forebrain
nTPM: 34.2
Samples: 4

Max nTPM: 38.4
Min nTPM: 29.7
Sample A Male 31.3
Sample B Male 29.7
Sample C Female 37.3
Sample D Female 38.4

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.5
71213005 Antisense, RP_050816_03_F07, Mouse strain C57BL/6J (56 days, male) 0.5
73512365 Antisense, RP_050816_03_F07, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 0.2
71213005 Antisense, RP_050816_03_F07, Mouse strain C57BL/6J (56 days, male) 0.2
73512365 Antisense, RP_050816_03_F07, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.