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HACD2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:16.0 nTPM
HPA:16.0 nTPM
GTEx:18.2 nTPM
FANTOM5:60.9 Scaled Tags Per Million
Pig:24.3 nTPM
Mouse:26.2 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB019282
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.0
Sample id Sample description nTPM
Hippocampus
nTPM: 14.9
1911 Female, age 85, right hemisphere 18.0
1898 Male, age 80, left hemisphere 16.0
1855 Male, age 76, left hemisphere 15.4
2621 Female, age 67, right hemisphere 14.0
2529 Female, age 94, left hemisphere 13.8
2148 Female, age 91, left hemisphere 12.2
Dentate gyrus
nTPM: 14.9
2010 Male, age 76, both hemispheres 17.0
2246 Female, age 85, both hemispheres 16.3
2530 Female, age 94, left hemisphere 15.7
2528 Male, age 74, both hemispheres 15.3
1927 Female, age 91, both hemispheres 13.7
2531 Female, age 67, both hemispheres 11.3
Entorhinal gyrus
nTPM: 14.7
1938 Female, age 85, left hemisphere 18.1
2117 Female, age 91, right hemisphere 16.6
1787 Male, age 76, left hemisphere 15.8
2764 Male, age 80, right hemisphere 13.7
2613 Female, age 94, left hemisphere 13.6
2686 Male, age 75, right hemisphere 10.1
Hippocampus, CA1
nTPM: 15.8
2749 Male, age 80, left hemisphere 20.5
1873 Female, age 85, both hemispheres 18.3
2082 Female, age 91, right hemisphere 13.8
2527 Male, age 74, both hemispheres 13.3
2045 Male, age 76, both hemispheres 13.0
Hippocampus, CA2
nTPM: 15.0
2249 Male, age 74, both hemispheres 18.2
1940 Female, age 85, left hemisphere 16.7
1963 Male, age 80, left hemisphere 16.0
1892 Male, age 76, both hemispheres 13.6
2113 Female, age 91, right hemisphere 13.5
2437 Female, age 94, left hemisphere 11.8
Hippocampus, CA3
nTPM: 14.5
1891 Female, age 85, both hemispheres 19.7
2137 Male, age 80, left hemisphere 16.5
2620 Female, age 94, left hemisphere 16.4
1867 Male, age 76, both hemispheres 13.7
2436 Male, age 74, both hemispheres 12.1
2861 Female, age 67, both hemispheres 8.9
Parahippocampal cortex
nTPM: 14.1
1933 Female, age 85, both hemispheres 16.2
1850 Male, age 80, both hemispheres 15.9
2693 Female, age 94, both hemispheres 15.7
1990 Female, age 91, right hemisphere 15.6
2250 Female, age 67, right hemisphere 15.2
2532 Female, age 72, left hemisphere 13.8
2018 Male, age 76, both hemispheres 13.5
2692 Male, age 74, both hemispheres 13.4
2245 Female, age 91, both hemispheres 12.2
2622 Female, age 67, right hemisphere 9.3
Perirhinal gyrus
nTPM: 15.6
1847 Female, age 91, left hemisphere 17.5
1841 Female, age 85, right hemisphere 16.4
2521 Female, age 94, right hemisphere 15.3
1794 Male, age 80, right hemisphere 15.1
2848 Male, age 76, right hemisphere 13.5
Subiculum
nTPM: 16.0
2042 Male, age 76, both hemispheres 18.9
1901 Male, age 80, both hemispheres 18.0
1977 Female, age 85, both hemispheres 17.6
2438 Female, age 94, left hemisphere 15.0
2729 Female, age 91, right hemisphere 14.6
2619 Male, age 74, both hemispheres 12.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.2
Samples: 197

Max nTPM: 35.6
Min nTPM: 8.1
Std nTPM: 5.3
Median nTPM: 17.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 35.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 34.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 34.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 32.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 32.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 31.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 30.5
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 30.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 29.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 29.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 28.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.9
FF:10153-102I9 76 years, female 74.7
FF:10169-103B7 60 years, female 47.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.3
Samples: 4

Max nTPM: 35.3
Min nTPM: 15.3
Sample A Female 35.3
Sample B Female 25.6
Sample C Male 20.9
Sample D Male 15.3
Entorhinal cortex
nTPM: 16.2
Samples: 4

Max nTPM: 19.6
Min nTPM: 13.2
Sample A Female 16.7
Sample B Female 19.6
Sample C Male 15.3
Sample D Male 13.2
Subiculum
nTPM: 15.9
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.6
Sample A Female 18.0
Sample B Female 15.7
Sample C Male 15.2
Sample D Male 14.6
Ventral hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 20.5
Min nTPM: 15.1
Sample A Female 20.5
Sample B Female 15.1
Sample C Male 18.7
Sample D Male 20.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.1
Samples: 4

Max nTPM: 25.5
Min nTPM: 20.7
Sample A Male 22.1
Sample B Male 20.7
Sample C Female 25.5
Sample D Female 24.2
Hippocampal formation
nTPM: 26.2
Samples: 4

Max nTPM: 29.2
Min nTPM: 24.3
Sample A Male 26.6
Sample B Male 24.3
Sample C Female 29.2
Sample D Female 24.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
75695645 Antisense, RP_060518_04_B08, Mouse strain C57BL/6J (56 days, male) 6.1

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The Human Protein Atlas

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