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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:39.9 nTPM
HPA:39.9 nTPM
GTEx:101.4 nTPM
FANTOM5:110.8 Scaled Tags Per Million
Mouse:27.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048362
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.9
Sample id Sample description nTPM
Hippocampus
nTPM: 35.4
1898 Male, age 80, left hemisphere 40.1
2529 Female, age 94, left hemisphere 36.2
2148 Female, age 91, left hemisphere 35.1
2621 Female, age 67, right hemisphere 34.4
1911 Female, age 85, right hemisphere 34.2
1855 Male, age 76, left hemisphere 32.4
Dentate gyrus
nTPM: 36.7
1927 Female, age 91, both hemispheres 40.8
2530 Female, age 94, left hemisphere 39.3
2010 Male, age 76, both hemispheres 35.8
2531 Female, age 67, both hemispheres 35.8
2246 Female, age 85, both hemispheres 34.2
2528 Male, age 74, both hemispheres 34.1
Entorhinal gyrus
nTPM: 38.2
2764 Male, age 80, right hemisphere 40.4
1787 Male, age 76, left hemisphere 39.4
1938 Female, age 85, left hemisphere 38.7
2613 Female, age 94, left hemisphere 38.7
2117 Female, age 91, right hemisphere 36.2
2686 Male, age 75, right hemisphere 36.1
Hippocampus, CA1
nTPM: 37.8
2749 Male, age 80, left hemisphere 47.3
2527 Male, age 74, both hemispheres 36.0
2045 Male, age 76, both hemispheres 35.8
1873 Female, age 85, both hemispheres 35.5
2082 Female, age 91, right hemisphere 34.2
Hippocampus, CA2
nTPM: 38.3
1892 Male, age 76, both hemispheres 44.7
2437 Female, age 94, left hemisphere 38.5
1963 Male, age 80, left hemisphere 37.8
1940 Female, age 85, left hemisphere 37.7
2249 Male, age 74, both hemispheres 35.7
2113 Female, age 91, right hemisphere 35.1
Hippocampus, CA3
nTPM: 37.4
2137 Male, age 80, left hemisphere 40.3
1867 Male, age 76, both hemispheres 39.8
2620 Female, age 94, left hemisphere 36.3
2861 Female, age 67, both hemispheres 36.2
1891 Female, age 85, both hemispheres 36.0
2436 Male, age 74, both hemispheres 35.5
Parahippocampal cortex
nTPM: 37.2
1933 Female, age 85, both hemispheres 39.6
1850 Male, age 80, both hemispheres 39.3
1990 Female, age 91, right hemisphere 39.2
2245 Female, age 91, both hemispheres 38.5
2018 Male, age 76, both hemispheres 37.9
2532 Female, age 72, left hemisphere 37.7
2250 Female, age 67, right hemisphere 37.0
2693 Female, age 94, both hemispheres 35.9
2622 Female, age 67, right hemisphere 33.8
2692 Male, age 74, both hemispheres 33.2
Perirhinal gyrus
nTPM: 39.9
1847 Female, age 91, left hemisphere 44.0
1841 Female, age 85, right hemisphere 41.1
1794 Male, age 80, right hemisphere 41.0
2521 Female, age 94, right hemisphere 36.8
2848 Male, age 76, right hemisphere 36.7
Subiculum
nTPM: 35.6
1977 Female, age 85, both hemispheres 38.6
1901 Male, age 80, both hemispheres 37.3
2619 Male, age 74, both hemispheres 34.8
2042 Male, age 76, both hemispheres 34.5
2729 Female, age 91, right hemisphere 34.1
2438 Female, age 94, left hemisphere 34.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 101.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 101.4
Samples: 197

Max nTPM: 282.2
Min nTPM: 30.2
Std nTPM: 36.9
Median nTPM: 94.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 282.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 242.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 223.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 219.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 215.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 197.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 188.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 184.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 174.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 170.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 169.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 110.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 110.8
FF:10169-103B7 60 years, female 144.3
FF:10153-102I9 76 years, female 77.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.6
Samples: 4

Max nTPM: 30.5
Min nTPM: 25.6
Sample A Male 25.6
Sample B Male 30.5
Sample C Female 27.3
Sample D Female 27.1
Hippocampal formation
nTPM: 21.0
Samples: 4

Max nTPM: 27.4
Min nTPM: 15.0
Sample A Male 24.1
Sample B Male 17.3
Sample C Female 15.0
Sample D Female 27.4

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.