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DYNLT2B
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.7 nTPM
HPA:15.7 nTPM
GTEx:29.1 nTPM
FANTOM5:56.5 Scaled Tags Per Million

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 15.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 13.9
2846 Female, age 79, unknown 14.7
1854 Male, age 80, left hemisphere 14.5
2290 Female, age 72, unknown 14.5
1857 Female, age 85, left hemisphere 14.4
2288 Male, age 75, left hemisphere 13.9
2481 Female, age 94, left hemisphere 13.6
1781 Male, age 74, unknown 13.1
2289 Male, age 61, right hemisphere 12.9
Claustrum
nTPM: 13.5
2198 Male, age 80, both hemispheres 14.5
1956 Male, age 74, unknown 14.2
2491 Male, age 75, both hemispheres 14.2
2196 Female, age 79, unknown 13.9
2392 Female, age 94, both hemispheres 13.7
2568 Male, age 61, both hemispheres 13.6
2284 Female, age 91, both hemispheres 13.3
2292 Female, age 85, both hemispheres 12.1
2645 Female, age 72, unknown 11.6
Globus pallidus, externus
nTPM: 12.9
2395 Male, age 75, both hemispheres 14.3
2772 Female, age 79, unknown 14.0
1996 Male, age 80, right hemisphere 12.3
2646 Male, age 61, right hemisphere 12.1
2567 Female, age 72, unknown 12.0
Globus pallidus, internus
nTPM: 13.3
2287 Male, age 75, right hemisphere 14.6
2483 Female, age 94, right hemisphere 14.1
2778 Female, age 91, both hemispheres 14.0
1818 Male, age 74, unknown 13.5
2037 Male, age 80, right hemisphere 13.3
2111 Female, age 85, right hemisphere 12.2
2566 Female, age 72, unknown 11.6
Nucleus accumbens
nTPM: 15.0
1856 Female, age 91, right hemisphere 17.1
2286 Male, age 75, left hemisphere 15.5
2732 Male, age 80, right hemisphere 15.3
2824 Male, age 61, right hemisphere 15.0
1806 Female, age 85, left hemisphere 14.8
2698 Female, age 72, unknown 14.8
1783 Male, age 74, unknown 14.3
2391 Female, age 94, left hemisphere 13.1
Nucleus basalis of Meynert
nTPM: 13.2
2393 Male, age 80, right hemisphere 14.7
2821 Male, age 75, both hemispheres 13.1
2484 Female, age 94, left hemisphere 13.0
2569 Male, age 61, both hemispheres 12.1
Nucleus of the diagonal band
nTPM: 15.7
1812 Female, age 91, both hemispheres 17.2
2775 Male, age 80, right hemisphere 17.1
1979 Male, age 74, unknown 15.2
2195 Female, age 85, both hemispheres 15.0
2029 Male, age 61, right hemisphere 13.9
Olfactory tubercle
nTPM: 15.1
1846 Male, age 80, right hemisphere 16.7
2856 Male, age 75, right hemisphere 15.3
1998 Female, age 91, both hemispheres 14.8
2487 Female, age 94, left hemisphere 13.6
Putamen
nTPM: 13.7
2466 Female, age 79, unknown 14.8
1937 Female, age 91, right hemisphere 14.6
2482 Female, age 94, left hemisphere 14.2
1829 Male, age 74, unknown 14.1
1838 Male, age 80, right hemisphere 13.8
2647 Male, age 75, left hemisphere 12.5
2489 Female, age 72, unknown 12.3
Septal nuclei
nTPM: 15.3
2031 Female, age 72, unknown 16.8
1960 Male, age 74, unknown 16.4
2629 Female, age 94, right hemisphere 16.0
2009 Female, age 91, both hemispheres 15.6
2199 Male, age 80, right hemisphere 15.6
2059 Female, age 85, both hemispheres 13.7
2394 Male, age 61, left hemisphere 13.2

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 29.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 23.6
Samples: 246

Max nTPM: 62.7
Min nTPM: 9.2
Std nTPM: 8.5
Median nTPM: 21.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 62.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 49.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 47.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 47.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 45.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 45.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 44.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 44.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 43.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 42.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 42.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 29.1
Samples: 246

Max nTPM: 61.2
Min nTPM: 5.2
Std nTPM: 9.4
Median nTPM: 28.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 61.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 56.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 54.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 53.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 53.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 51.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 48.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 48.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 46.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 46.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 45.7
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Brain - Putamen (basal ganglia)
Average nTPM: 21.4
Samples: 205

Max nTPM: 47.9
Min nTPM: 7.1
Std nTPM: 7.9
Median nTPM: 20.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 47.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 47.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 42.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 42.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 39.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 39.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 39.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 39.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 37.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 35.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 35.6
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 47.7
FF:10164-103B2 76 years, female 47.7
Globus pallidus
Scaled Tags Per Million: 29.7
FF:10175-103C4 60 years, female 40.2
FF:10161-103A8 76 years, female 19.3
Nucleus accumbens
Scaled Tags Per Million: 37.1
FF:10037-101F1 23-56 years, mixed 37.1
Putamen
Scaled Tags Per Million: 56.5
FF:10176-103C5 60 years, female 56.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.