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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:93.5 nTPM
HPA:93.5 nTPM
GTEx:81.5 nTPM
FANTOM5:147.3 Scaled Tags Per Million
Mouse:52.3 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055972Antibody HPA055973Antibody CAB040547
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedLow






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.5
Sample id Sample description nTPM
Hippocampus
nTPM: 93.3
1911 Female, age 85, right hemisphere 97.0
2148 Female, age 91, left hemisphere 95.4
2529 Female, age 94, left hemisphere 94.0
2621 Female, age 67, right hemisphere 93.2
1855 Male, age 76, left hemisphere 90.3
1898 Male, age 80, left hemisphere 89.8
Dentate gyrus
nTPM: 90.3
2246 Female, age 85, both hemispheres 94.1
1927 Female, age 91, both hemispheres 91.8
2531 Female, age 67, both hemispheres 91.3
2528 Male, age 74, both hemispheres 89.4
2530 Female, age 94, left hemisphere 87.9
2010 Male, age 76, both hemispheres 87.5
Entorhinal gyrus
nTPM: 88.2
2117 Female, age 91, right hemisphere 94.6
1787 Male, age 76, left hemisphere 88.4
2764 Male, age 80, right hemisphere 88.1
1938 Female, age 85, left hemisphere 87.5
2686 Male, age 75, right hemisphere 87.4
2613 Female, age 94, left hemisphere 82.9
Hippocampus, CA1
nTPM: 92.0
2527 Male, age 74, both hemispheres 94.5
2045 Male, age 76, both hemispheres 94.3
1873 Female, age 85, both hemispheres 93.6
2082 Female, age 91, right hemisphere 93.4
2749 Male, age 80, left hemisphere 84.1
Hippocampus, CA2
nTPM: 88.6
2113 Female, age 91, right hemisphere 92.5
1892 Male, age 76, both hemispheres 90.0
2249 Male, age 74, both hemispheres 90.0
1940 Female, age 85, left hemisphere 88.5
2437 Female, age 94, left hemisphere 87.6
1963 Male, age 80, left hemisphere 83.0
Hippocampus, CA3
nTPM: 93.5
2436 Male, age 74, both hemispheres 99.0
2620 Female, age 94, left hemisphere 98.2
1891 Female, age 85, both hemispheres 94.6
2861 Female, age 67, both hemispheres 91.4
1867 Male, age 76, both hemispheres 90.7
2137 Male, age 80, left hemisphere 87.2
Parahippocampal cortex
nTPM: 90.0
2245 Female, age 91, both hemispheres 93.5
2692 Male, age 74, both hemispheres 93.0
2622 Female, age 67, right hemisphere 91.3
2250 Female, age 67, right hemisphere 91.0
2693 Female, age 94, both hemispheres 89.4
1990 Female, age 91, right hemisphere 89.3
2018 Male, age 76, both hemispheres 89.3
1850 Male, age 80, both hemispheres 89.0
1933 Female, age 85, both hemispheres 88.1
2532 Female, age 72, left hemisphere 86.3
Perirhinal gyrus
nTPM: 88.5
1794 Male, age 80, right hemisphere 89.8
1847 Female, age 91, left hemisphere 89.0
1841 Female, age 85, right hemisphere 88.7
2848 Male, age 76, right hemisphere 87.8
2521 Female, age 94, right hemisphere 87.3
Subiculum
nTPM: 90.4
2729 Female, age 91, right hemisphere 95.0
2619 Male, age 74, both hemispheres 94.5
1901 Male, age 80, both hemispheres 88.4
2042 Male, age 76, both hemispheres 88.4
1977 Female, age 85, both hemispheres 87.9
2438 Female, age 94, left hemisphere 87.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 81.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 81.5
Samples: 197

Max nTPM: 174.9
Min nTPM: 26.7
Std nTPM: 25.4
Median nTPM: 78.7
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 174.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 159.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 157.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 156.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 144.4
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 141.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 137.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 137.3
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 128.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 127.1
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 123.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 147.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 147.3
FF:10153-102I9 76 years, female 200.5
FF:10169-103B7 60 years, female 94.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.1
Samples: 4

Max nTPM: 31.2
Min nTPM: 25.2
Sample A Male 29.4
Sample B Male 26.6
Sample C Female 31.2
Sample D Female 25.2
Hippocampal formation
nTPM: 52.4
Samples: 4

Max nTPM: 63.4
Min nTPM: 45.2
Sample A Male 45.2
Sample B Male 51.4
Sample C Female 63.4
Sample D Female 49.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
71656927 Antisense, RP_050927_04_E09, Mouse strain C57BL/6J (56 days, male) 1.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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